RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 C9IYK1 514 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 DCLK1O15075 740 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 EDF1O60869 148 aaKnown RBP22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 GSTA1P08263 222 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 PYGBP11216 843 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 LPIN1Q14693 890 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 PAFAH1B3Q15102 231 aaKnown RBP22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 BHLHA9Q7RTU4 235 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 HAUS2Q9NVX0 235 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 DDIT4Q9NX09 232 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 INPP5FQ9Y2H2 1132 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 HGSO14964 777 aaPredicted RBP22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 UGT1A9O60656 530 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 LPXNO60711 386 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 GLUD2P49448 558 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 DSC3Q14574 896 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 PDK1Q15118 436 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 CD300LGQ6UXG3 332 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 ECHDC2Q86YB7 292 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 PDCD7Q8N8D1 485 aaKnown RBP22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 NTAN1Q96AB6 310 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 PLCD4Q9BRC7 762 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 UGT1A7Q9HAW7 530 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 UGT1A10Q9HAW8 530 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 UGT1A8Q9HAW9 530 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 SEPT10Q9P0V9 454 aa22.3■■□□□ 1.16
GRAMD1A-212ENST00000600231 RASSF9O75901 435 aa22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 DNAJC8O75937 253 aaPredicted RBP22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 ODC1P11926 461 aa22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 ERCC2P18074 760 aa22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 BDNFP23560 247 aa22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 FDFT1P37268 417 aa22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 SLC18A2Q05940 514 aa22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 GALNTL6Q49A17 601 aa22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 TTC39BQ5VTQ0 682 aaPredicted RBP22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 KLHDC9Q8NEP7 349 aa22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 CSNK1G1Q9HCP0 422 aa22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 FBXW11Q9UKB1 542 aa22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 ABT1Q9ULW3 272 aaKnown RBP22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 TRIM49D1C9J1S8 452 aa22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 RPLP2P05387 115 aaKnown RBP22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 RAB27AP51159 221 aa22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 WASHC5Q12768 1159 aa22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 RNF43Q68DV7 783 aa22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 CCSAPQ6IQ19 270 aaPredicted RBP22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 GSDMBQ8TAX9 411 aa22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 TRMT13Q9NUP7 481 aaKnown RBP22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 PIH1D1Q9NWS0 290 aaKnown RBP22.29■■□□□ 1.16
GRAMD1A-212ENST00000600231 SF3B1O75533 1304 aaKnown RBP eCLIP22.29■■□□□ 1.161e-6■■■■■ 96.6
GRAMD1A-212ENST00000600231 NUP205Q92621 2012 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 OPHN1O60890 802 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 ELNP15502 786 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 HNRNPH1P31943 449 aaKnown RBP22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 SCAPQ12770 1279 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 SEMA3BQ13214 749 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 FAM171BQ6P995 826 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 ACBD6Q9BR61 282 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 COLEC11Q9BWP8 271 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 ALG13Q9NP73 1137 aaKnown RBP22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 TMLHEQ9NVH6 421 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 ZNF180Q9UJW8 692 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 GSTA2P09210 222 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 CSH1P0DML2 217 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 CSH2P0DML3 217 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 AIF1P55008 147 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 SARNPP82979 210 aaKnown RBP22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 SLC20A2Q08357 652 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 ZNF567Q8N184 647 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 PGAP3Q96FM1 320 aaPredicted RBP22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 APOPT1Q96IL0 206 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 RXFP1Q9HBX9 757 aa22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 TDRD15B5MCY1 1934 aaKnown RBP22.28■■□□□ 1.16
GRAMD1A-212ENST00000600231 PPP1R12AO14974 1030 aaPredicted RBP22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 KRT37O76014 449 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 STK10O94804 968 aaKnown RBP22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 SNRPAP09012 282 aaKnown RBP22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 PRKAR2AP13861 404 aaKnown RBP22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 NEK3P51956 506 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 CRADDP78560 199 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 INTS6LQ5JSJ4 861 aaKnown RBP22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 OTOAQ7RTW8 1153 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 TMEM209Q96SK2 561 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 VPS11Q9H270 941 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 PCDHA11Q9Y5I1 949 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 KCNK1O00180 336 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 ITGB1P05556 798 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 PSMB4P28070 264 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 ETV4P43268 484 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 TPI1P60174 286 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 CDK16Q00536 496 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 LRRTM3Q86VH5 581 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 METTL23Q86XA0 190 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 GBP7Q8N8V2 638 aaPredicted RBP22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 ANKLE1Q8NAG6 615 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 OR10T2Q8NGX3 314 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 FAM111AQ96PZ2 611 aa22.27■■□□□ 1.16
GRAMD1A-212ENST00000600231 WDR27A2RRH5 827 aa22.26■■□□□ 1.15
GRAMD1A-212ENST00000600231 FAM159BA6NKW6 160 aa22.26■■□□□ 1.15
GRAMD1A-212ENST00000600231 F8W810 466 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms