RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 RNF187Q5TA31 235 aaPredicted RBP14.92□□□□□ -0.02
VRK3-217ENST00000599538 GLB1LQ6UWU2 654 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 MCUQ8NE86 351 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 UROC1Q96N76 676 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 SMC6Q96SB8 1091 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 CYTH2Q99418 400 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 WDCPQ9H6R7 721 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 FETUBQ9UGM5 382 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 NUDT5Q9UKK9 219 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 DSEQ9UL01 958 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 HACD1B0YJ81 288 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 PRPF4O43172 522 aaKnown RBP eCLIP14.92□□□□□ -0.02
VRK3-217ENST00000599538 UGT1A9O60656 530 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 OR1G1P47890 313 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 CXCR3P49682 368 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 LIG3P49916 1009 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 SLC5A3P53794 718 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 TPI1P60174 286 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 CRADDP78560 199 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 FAAP100Q0VG06 881 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 CBLBQ13191 982 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 OLIG2Q13516 323 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 NOMO2Q5JPE7 1267 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 SDHAF4Q5VUM1 108 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 TRMT10BQ6PF06 316 aaKnown RBP14.92□□□□□ -0.02
VRK3-217ENST00000599538 UNC5AQ6ZN44 842 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 COLGALT2Q8IYK4 626 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 ZNF567Q8N184 647 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 PDCD7Q8N8D1 485 aaKnown RBP14.92□□□□□ -0.02
VRK3-217ENST00000599538 SLC43A3Q8NBI5 491 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 DQX1Q8TE96 717 aaKnown RBP14.92□□□□□ -0.02
VRK3-217ENST00000599538 TGS1Q96RS0 853 aaKnown RBP14.92□□□□□ -0.02
VRK3-217ENST00000599538 UGT1A7Q9HAW7 530 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 UGT1A10Q9HAW8 530 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 UGT1A8Q9HAW9 530 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 TBC1D13Q9NVG8 400 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 HCSTQ9UBK5 93 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 GGA2Q9UJY4 613 aa14.92□□□□□ -0.02
VRK3-217ENST00000599538 TSHRP16473 764 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 ATP2A2P16615 1042 aaKnown RBP14.91□□□□□ -0.02
VRK3-217ENST00000599538 TPSB2P20231 275 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 TAC1P20366 129 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 CA4P22748 312 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 PSMB4P28070 264 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 FAM189BP81408 668 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 TPSAB1Q15661 275 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 SLC39A12Q504Y0 691 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 CGB2Q6NT52 195 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 SPATS2Q86XZ4 545 aaKnown RBP14.91□□□□□ -0.02
VRK3-217ENST00000599538 THEM5Q8N1Q8 247 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 PXYLP1Q8TE99 480 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 SLC44A1Q8WWI5 657 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 SERAC1Q96JX3 654 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 PGLYRP2Q96PD5 576 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 PPCSQ9HAB8 311 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 OR12D3Q9UGF7 316 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.91□□□□□ -0.02
VRK3-217ENST00000599538 MAD1L1Q9Y6D9 718 aa14.91□□□□□ -0.02
VRK3-217ENST00000599538 MKI67P46013 3256 aaKnown RBP14.91□□□□□ -0.02
VRK3-217ENST00000599538 COL4A4P53420 1690 aaPredicted RBP14.91□□□□□ -0.02
VRK3-217ENST00000599538 TNFRSF10BO14763 440 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 SNX3O60493 162 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 LRIG2O94898 1065 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 EOMESO95936 686 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 GRIK1P39086 918 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 GLUD2P49448 558 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 GPR15P49685 360 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 GATMP50440 423 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 TSPY1Q01534 308 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 PDK1Q15118 436 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 MICALCLQ6ZW33 695 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 UNC5BQ8IZJ1 945 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 OTUD6BQ8N6M0 293 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 CCDC197Q8NCU1 140 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 SGSM3Q96HU1 749 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 B3GALT6Q96L58 329 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 MAGEB18Q96M61 343 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 SFMBT1Q9UHJ3 866 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 PCDHB8Q9UN66 801 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 SHROOM3Q8TF72 1996 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 VWA8A3KMH1 1905 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 MSI1O43347 362 aaKnown RBP14.9□□□□□ -0.02
VRK3-217ENST00000599538 NBNO60934 754 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 TOMM70O94826 608 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 KIAA0754O94854 1291 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 MYCP01106 439 aaPredicted RBP14.9□□□□□ -0.02
VRK3-217ENST00000599538 TYMPP19971 482 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 SPARCL1Q14515 664 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 TCTN1Q2MV58 587 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 C4orf22Q6V702 233 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 FAM47EQ6ZV65 393 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 BZW1Q7L1Q6 419 aaKnown RBP14.9□□□□□ -0.02
VRK3-217ENST00000599538 SCD5Q86SK9 330 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 SPATA2LQ8IUW3 424 aaPredicted RBP14.9□□□□□ -0.02
VRK3-217ENST00000599538 CTAGE3PQ8IX95 158 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 PPM1NQ8N819 430 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 IRGQQ8WZA9 623 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 EBNA1BP2Q99848 306 aaKnown RBP14.9□□□□□ -0.02
VRK3-217ENST00000599538 GORASP1Q9BQQ3 440 aa14.9□□□□□ -0.02
VRK3-217ENST00000599538 FRMD8Q9BZ67 464 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms