RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 LMBRD1Q9NUN5 540 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 DNAJC12Q9UKB3 198 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 PCDHGC3Q9UN70 934 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 CYP8B1Q9UNU6 501 aa23.92■■□□□ 1.42
SSBP4-205ENST00000598159 LNP1A1A4G5 178 aa23.91■■□□□ 1.42
SSBP4-205ENST00000598159 TBL1XO60907 577 aa23.91■■□□□ 1.42
SSBP4-205ENST00000598159 SLC6A4P31645 630 aa23.91■■□□□ 1.42
SSBP4-205ENST00000598159 ZNF33AQ06730 810 aa23.91■■□□□ 1.42
SSBP4-205ENST00000598159 FAM133BQ5BKY9 247 aaKnown RBP23.91■■□□□ 1.42
SSBP4-205ENST00000598159 KIAA1324Q6UXG2 1013 aaKnown RBP23.91■■□□□ 1.42
SSBP4-205ENST00000598159 CHST9Q7L1S5 443 aa23.91■■□□□ 1.42
SSBP4-205ENST00000598159 AHI1Q8N157 1196 aa23.91■■□□□ 1.42
SSBP4-205ENST00000598159 LSM14BQ9BX40 385 aaKnown RBP23.91■■□□□ 1.42
SSBP4-205ENST00000598159 NUSAP1Q9BXS6 441 aaKnown RBP23.91■■□□□ 1.42
SSBP4-205ENST00000598159 ITM2CQ9NQX7 267 aa23.91■■□□□ 1.42
SSBP4-205ENST00000598159 TMEM74BQ9NUR3 256 aa23.91■■□□□ 1.42
SSBP4-205ENST00000598159 ABCB8Q9NUT2 735 aa23.91■■□□□ 1.42
SSBP4-205ENST00000598159 GGA2Q9UJY4 613 aa23.91■■□□□ 1.42
SSBP4-205ENST00000598159 PILRBQ9UKJ0 227 aa23.91■■□□□ 1.42
SSBP4-205ENST00000598159 PI4KAP42356 2102 aa23.9■■□□□ 1.42
SSBP4-205ENST00000598159 TNRC6BQ9UPQ9 1833 aaKnown RBP23.9■■□□□ 1.42
SSBP4-205ENST00000598159 PATE3B3GLJ2 98 aa23.9■■□□□ 1.42
SSBP4-205ENST00000598159 NDUFS2O75306 463 aa23.9■■□□□ 1.42
SSBP4-205ENST00000598159 PABPC1P11940 636 aaKnown RBP23.9■■□□□ 1.42
SSBP4-205ENST00000598159 SNX16P57768 344 aa23.9■■□□□ 1.42
SSBP4-205ENST00000598159 LMAN2Q12907 356 aa23.9■■□□□ 1.42
SSBP4-205ENST00000598159 PDCLQ13371 301 aa23.9■■□□□ 1.42
SSBP4-205ENST00000598159 TRIM61Q5EBN2 209 aa23.9■■□□□ 1.42
SSBP4-205ENST00000598159 MIIPQ5JXC2 388 aa23.9■■□□□ 1.42
SSBP4-205ENST00000598159 DAB2IPQ5VWQ8 1189 aa23.9■■□□□ 1.42
SSBP4-205ENST00000598159 PEAR1Q5VY43 1037 aaPredicted RBP23.9■■□□□ 1.42
SSBP4-205ENST00000598159 SERPINA13PQ6UXR4 307 aa23.9■■□□□ 1.42
SSBP4-205ENST00000598159 TMPRSS6Q8IU80 811 aa23.9■■□□□ 1.42
SSBP4-205ENST00000598159 WDTC1Q8N5D0 677 aa23.9■■□□□ 1.42
SSBP4-205ENST00000598159 CEP76Q8TAP6 659 aa23.9■■□□□ 1.42
SSBP4-205ENST00000598159 SORCS1Q8WY21 1168 aa23.9■■□□□ 1.42
SSBP4-205ENST00000598159 SLC6A17Q9H1V8 727 aa23.9■■□□□ 1.42
SSBP4-205ENST00000598159 TYW5A2RUC4 315 aaKnown RBP23.89■■□□□ 1.41
SSBP4-205ENST00000598159 C4orf47A7E2U8 309 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 FOXN3O00409 490 aaPredicted RBP23.89■■□□□ 1.41
SSBP4-205ENST00000598159 ATP5BP06576 529 aaKnown RBP23.89■■□□□ 1.41
SSBP4-205ENST00000598159 EPHX1P07099 455 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 GLI1P08151 1106 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 ITPKAP23677 461 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 KRT9P35527 623 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 SGSHP51688 502 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 BPIFB4P59827 614 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 DUOXA1Q1HG43 343 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 EFHC1Q5JVL4 640 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 NADSYN1Q6IA69 706 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 SLC23A3Q6PIS1 610 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 RABEPKQ7Z6M1 372 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 ADIPOR2Q86V24 386 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 DEFB119Q8N690 84 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 HJURPQ8NCD3 748 aaPredicted RBP23.89■■□□□ 1.41
SSBP4-205ENST00000598159 FIBINQ8TAL6 211 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 SIPA1Q96FS4 1042 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 ZNF419Q96HQ0 510 aaPredicted RBP23.89■■□□□ 1.41
SSBP4-205ENST00000598159 PPP1R13BQ96KQ4 1090 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 NOX5Q96PH1 765 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 MKRN2Q9H000 416 aaKnown RBP23.89■■□□□ 1.41
SSBP4-205ENST00000598159 TMEM9BQ9NQ34 198 aa23.89■■□□□ 1.41
SSBP4-205ENST00000598159 TRUB2O95900 331 aaKnown RBP23.88■■□□□ 1.41
SSBP4-205ENST00000598159 APOEP02649 317 aa23.88■■□□□ 1.41
SSBP4-205ENST00000598159 ADRB1P08588 477 aa23.88■■□□□ 1.41
SSBP4-205ENST00000598159 CD6P30203 668 aa23.88■■□□□ 1.41
SSBP4-205ENST00000598159 CLCN1P35523 988 aa23.88■■□□□ 1.41
SSBP4-205ENST00000598159 TAC4Q86UU9 113 aa23.88■■□□□ 1.41
SSBP4-205ENST00000598159 CCDC117Q8IWD4 279 aaPredicted RBP23.88■■□□□ 1.41
SSBP4-205ENST00000598159 ADAM32Q8TC27 787 aa23.88■■□□□ 1.41
SSBP4-205ENST00000598159 PRCCQ92733 491 aaPredicted RBP23.88■■□□□ 1.41
SSBP4-205ENST00000598159 FOXJ1Q92949 421 aa23.88■■□□□ 1.41
SSBP4-205ENST00000598159 TMEM245Q9H330 911 aa23.88■■□□□ 1.41
SSBP4-205ENST00000598159 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.88■■□□□ 1.411e-7■■■■□ 22.5
SSBP4-205ENST00000598159 ASNSD1Q9NWL6 643 aa23.88■■□□□ 1.41
SSBP4-205ENST00000598159 STIM2Q9P246 746 aa23.88■■□□□ 1.41
SSBP4-205ENST00000598159 USP36Q9P275 1121 aaKnown RBP23.88■■□□□ 1.41
SSBP4-205ENST00000598159 SLC12A6Q9UHW9 1150 aa23.88■■□□□ 1.41
SSBP4-205ENST00000598159 KCNJ18B7U540 433 aa23.87■■□□□ 1.41
SSBP4-205ENST00000598159 CDX4O14627 284 aaPredicted RBP23.87■■□□□ 1.41
SSBP4-205ENST00000598159 POLR2EP19388 210 aaKnown RBP23.87■■□□□ 1.41
SSBP4-205ENST00000598159 PRKCHP24723 683 aa23.87■■□□□ 1.41
SSBP4-205ENST00000598159 OXTRP30559 389 aa23.87■■□□□ 1.41
SSBP4-205ENST00000598159 KCNJ12Q14500 433 aa23.87■■□□□ 1.41
SSBP4-205ENST00000598159 FNDC3BQ53EP0 1204 aaKnown RBP23.87■■□□□ 1.41
SSBP4-205ENST00000598159 HSP90AA4PQ58FG1 418 aa23.87■■□□□ 1.41
SSBP4-205ENST00000598159 MS4A13Q5J8X5 152 aa23.87■■□□□ 1.41
SSBP4-205ENST00000598159 SYCP2LQ5T4T6 812 aa23.87■■□□□ 1.41
SSBP4-205ENST00000598159 MBLAC2Q68D91 279 aa23.87■■□□□ 1.41
SSBP4-205ENST00000598159 DPY19L2P1Q6NXN4 242 aa23.87■■□□□ 1.41
SSBP4-205ENST00000598159 MFN1Q8IWA4 741 aa23.87■■□□□ 1.41
SSBP4-205ENST00000598159 FAM71AQ8IYT1 594 aa23.87■■□□□ 1.41
SSBP4-205ENST00000598159 BTN2A3PQ96KV6 586 aa23.87■■□□□ 1.41
SSBP4-205ENST00000598159 CPXM1Q96SM3 734 aa23.87■■□□□ 1.41
SSBP4-205ENST00000598159 SAMSN1Q9NSI8 373 aaKnown RBP23.87■■□□□ 1.41
SSBP4-205ENST00000598159 WSB2Q9NYS7 404 aaPredicted RBP23.87■■□□□ 1.41
SSBP4-205ENST00000598159 SLC6A14Q9UN76 642 aa23.87■■□□□ 1.41
SSBP4-205ENST00000598159 CKAP5Q14008 2032 aa23.87■■□□□ 1.41
SSBP4-205ENST00000598159 IGLV3-25P01717 112 aa23.86■■□□□ 1.41
SSBP4-205ENST00000598159 DLDP09622 509 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms