RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 RNF157Q96PX1 679 aa15.17■□□□□ 0.02
VRK3-212ENST00000596814 AP1M1Q9BXS5 423 aa15.17■□□□□ 0.02
VRK3-212ENST00000596814 SIK2Q9H0K1 926 aa15.17■□□□□ 0.02
VRK3-212ENST00000596814 TASP1Q9H6P5 420 aa15.17■□□□□ 0.02
VRK3-212ENST00000596814 SMPD4Q9NXE4 827 aa15.17■□□□□ 0.02
VRK3-212ENST00000596814 CWC15Q9P013 229 aaKnown RBP15.17■□□□□ 0.02
VRK3-212ENST00000596814 OR12D3Q9UGF7 316 aa15.17■□□□□ 0.02
VRK3-212ENST00000596814 MRPS23Q9Y3D9 190 aaKnown RBP15.17■□□□□ 0.02
VRK3-212ENST00000596814 SNX10Q9Y5X0 201 aa15.17■□□□□ 0.02
VRK3-212ENST00000596814 CPQQ9Y646 472 aa15.17■□□□□ 0.02
VRK3-212ENST00000596814 HS3ST4Q9Y661 456 aa15.17■□□□□ 0.02
VRK3-212ENST00000596814 SOBPA7XYQ1 873 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 FAM72CH0Y354 149 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 STC2O76061 302 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 POU3F3P20264 500 aaPredicted RBP15.16■□□□□ 0.02
VRK3-212ENST00000596814 DYNLT1P63172 113 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 ITIH3Q06033 890 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 ADCY2Q08462 1091 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 C2orf54Q08AI8 447 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 TFDP2Q14188 446 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 ADGRE1Q14246 886 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 FAM72AQ5TYM5 149 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 PIK3R6Q5UE93 754 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 FAM72DQ6L9T8 149 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 BBS12Q6ZW61 710 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 FAM72BQ86X60 149 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 LRCH3Q96II8 777 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 APOL5Q9BWW9 433 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 SLC46A2Q9BY10 475 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 SLITRK6Q9H5Y7 841 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 GKN1Q9NS71 199 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 ZMYM5Q9UJ78 669 aa15.16■□□□□ 0.02
VRK3-212ENST00000596814 CST8O60676 142 aa15.15■□□□□ 0.02
VRK3-212ENST00000596814 LRIG2O94898 1065 aa15.15■□□□□ 0.02
VRK3-212ENST00000596814 HOXB8P17481 243 aaPredicted RBP15.15■□□□□ 0.02
VRK3-212ENST00000596814 CEBPBP17676 345 aa15.15■□□□□ 0.02
VRK3-212ENST00000596814 IGFBP4P22692 258 aa15.15■□□□□ 0.02
VRK3-212ENST00000596814 CORO1AP31146 461 aaKnown RBP15.15■□□□□ 0.02
VRK3-212ENST00000596814 NRG1Q02297 640 aaPredicted RBP15.15■□□□□ 0.02
VRK3-212ENST00000596814 ADAM15Q13444 863 aa15.15■□□□□ 0.02
VRK3-212ENST00000596814 SIX1Q15475 284 aaPredicted RBP15.15■□□□□ 0.02
VRK3-212ENST00000596814 MS4A13Q5J8X5 152 aa15.15■□□□□ 0.02
VRK3-212ENST00000596814 ACBD5Q5T8D3 534 aaPredicted RBP15.15■□□□□ 0.02
VRK3-212ENST00000596814 SYCE2Q6PIF2 218 aa15.15■□□□□ 0.02
VRK3-212ENST00000596814 RFX8Q6ZV50 586 aa15.15■□□□□ 0.02
VRK3-212ENST00000596814 GPR149Q86SP6 731 aa15.15■□□□□ 0.02
VRK3-212ENST00000596814 LRRN4CLQ8ND94 238 aa15.15■□□□□ 0.02
VRK3-212ENST00000596814 PCDH19Q8TAB3 1148 aa15.15■□□□□ 0.02
VRK3-212ENST00000596814 C1orf74Q96LT6 269 aa15.15■□□□□ 0.02
VRK3-212ENST00000596814 RBM12Q9NTZ6 932 aaKnown RBP15.15■□□□□ 0.02
VRK3-212ENST00000596814 NUP210Q8TEM1 1887 aaPredicted RBP15.15■□□□□ 0.02
VRK3-212ENST00000596814 CCDC188H7C350 402 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 APOL1O14791 398 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 DAPK3O43293 454 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 HTR7P34969 479 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 AVPR1AP37288 418 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 HCAR3P49019 387 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 SLC11A2P49281 568 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 DPYSQ14117 519 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 MANEALQ5VSG8 457 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 SLC9A4Q6AI14 798 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 CHSY1Q86X52 802 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 ZDHHC14Q8IZN3 488 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 CMTM8Q8IZV2 173 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 PQLC3Q8N755 202 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 ITFG1Q8TB96 612 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 ING5Q8WYH8 240 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 FAM161BQ96MY7 647 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 GAS2L1Q99501 681 aaPredicted RBP15.14■□□□□ 0.01
VRK3-212ENST00000596814 ARHGEF4Q9NR80 690 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 ARHGAP26Q9UNA1 814 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 NR2E1Q9Y466 385 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 E9PAM4 449 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 ACSL4O60488 711 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 TBX10O75333 385 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 ZFXP17010 805 aaPredicted RBP15.14■□□□□ 0.01
VRK3-212ENST00000596814 MLLT6P55198 1093 aaPredicted RBP15.14■□□□□ 0.01
VRK3-212ENST00000596814 RAP1GAP2Q684P5 730 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 DENND1CQ8IV53 801 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 PRELID2Q8N945 189 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 ADAMTS19Q8TE59 1207 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 WBP2Q969T9 261 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 AZIN2Q96A70 460 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 HAUS1Q96CS2 278 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 TBC1D31Q96DN5 1066 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 DCLK3Q9C098 648 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 PRDM16Q9HAZ2 1276 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 CLDND1Q9NY35 253 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 LSM7Q9UK45 103 aaKnown RBP15.14■□□□□ 0.01
VRK3-212ENST00000596814 NEU3Q9UQ49 428 aa15.14■□□□□ 0.01
VRK3-212ENST00000596814 APOC4-APOC2K7ER74 178 aa15.13■□□□□ 0.01
VRK3-212ENST00000596814 PHF2O75151 1096 aa15.13■□□□□ 0.01
VRK3-212ENST00000596814 LATS1O95835 1130 aa15.13■□□□□ 0.01
VRK3-212ENST00000596814 APOC2P02655 101 aa15.13■□□□□ 0.01
VRK3-212ENST00000596814 KLKB1P03952 638 aa15.13■□□□□ 0.01
VRK3-212ENST00000596814 TGM2P21980 687 aa15.13■□□□□ 0.01
VRK3-212ENST00000596814 AMPD1P23109 780 aa15.13■□□□□ 0.01
VRK3-212ENST00000596814 FSHRP23945 695 aa15.13■□□□□ 0.01
VRK3-212ENST00000596814 EPHB2P29323 1055 aa15.13■□□□□ 0.01
VRK3-212ENST00000596814 HOXC13P31276 330 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms