RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 PROB1E7EW31 1015 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 M0QYT0 321 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 DDX3XO00571 662 aaKnown RBP eCLIP11.57□□□□□ -0.563e-12■■□□□ 11.9
VRK3-210ENST00000596121 TBL1XO60907 577 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 LILRB5O75023 590 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 KLF8O95600 359 aaPredicted RBP11.57□□□□□ -0.56
VRK3-210ENST00000596121 ADCY5O95622 1261 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 TACR2P21452 398 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 PRKCIP41743 596 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 SLC11A2P49281 568 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 DGKGP49619 791 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 CXCR3P49682 368 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 IRAK1P51617 712 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 SNX16P57768 344 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 RPS24P62847 133 aaKnown RBP11.57□□□□□ -0.56
VRK3-210ENST00000596121 SRSF5Q13243 272 aaKnown RBP11.57□□□□□ -0.56
VRK3-210ENST00000596121 DMC1Q14565 340 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 ASIC2Q16515 512 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 MPPE1Q53F39 396 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 MS4A13Q5J8X5 152 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 SH3PXD2AQ5TCZ1 1133 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 SFMBT2Q5VUG0 894 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 EGFLAMQ63HQ2 1017 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 RAP1GAP2Q684P5 730 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 HEATR6Q6AI08 1181 aaKnown RBP11.57□□□□□ -0.56
VRK3-210ENST00000596121 ACAD10Q6JQN1 1059 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 MON1BQ7L1V2 547 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 SYT13Q7L8C5 426 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 C14orf80Q86SX3 495 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 GAS2L3Q86XJ1 694 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 CFAP52Q8N1V2 620 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 TXNDC5Q8NBS9 432 aaKnown RBP11.57□□□□□ -0.56
VRK3-210ENST00000596121 CPLX3Q8WVH0 158 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 EXOC4Q96A65 974 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 TMA16Q96EY4 203 aaKnown RBP11.57□□□□□ -0.56
VRK3-210ENST00000596121 CFAP57Q96MR6 1250 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 HHIPQ96QV1 700 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 IRF2BPLQ9H1B7 796 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 METTL5Q9NRN9 209 aaKnown RBP11.57□□□□□ -0.56
VRK3-210ENST00000596121 ADAM22Q9P0K1 906 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 STARD13Q9Y3M8 1113 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 FANCMQ8IYD8 2048 aa11.57□□□□□ -0.56
VRK3-210ENST00000596121 RIF1Q5UIP0 2472 aaKnown RBP11.57□□□□□ -0.56
VRK3-210ENST00000596121 A0A1W2PQJ5 194 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 WASH3PC4AMC7 463 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 HRO43593 1189 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 ATG13O75143 517 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 GYPCP04921 128 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 PLEKP08567 350 aaPredicted RBP11.56□□□□□ -0.56
VRK3-210ENST00000596121 TNFAIP3P21580 790 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 HLA-FP30511 346 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 HOXA6P31267 233 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 RFC1P35251 1148 aaPredicted RBP11.56□□□□□ -0.56
VRK3-210ENST00000596121 GGCXP38435 758 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 WASP42768 502 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 NSFP46459 744 aaKnown RBP11.56□□□□□ -0.56
VRK3-210ENST00000596121 SULT1E1P49888 294 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 MRPS21P82921 87 aaKnown RBP11.56□□□□□ -0.56
VRK3-210ENST00000596121 PPP2R5DQ14738 602 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 SLC25A52Q3SY17 297 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 CCDC14Q49A88 953 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 ASCL5Q7RTU5 278 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 KIAA0907Q7Z7F0 614 aaPredicted RBP11.56□□□□□ -0.56
VRK3-210ENST00000596121 RXFP2Q8WXD0 754 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 SORCS1Q8WY21 1168 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 IGSF8Q969P0 613 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 ERLEC1Q96DZ1 483 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 MAGEB5Q9BZ81 275 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 CD248Q9HCU0 757 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 SEPT11Q9NVA2 429 aaKnown RBP11.56□□□□□ -0.56
VRK3-210ENST00000596121 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.56□□□□□ -0.56
VRK3-210ENST00000596121 ZSCAN32Q9NX65 697 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 STIM2Q9P246 746 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 MMP17Q9ULZ9 603 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 CAPN11Q9UMQ6 739 aa11.56□□□□□ -0.56
VRK3-210ENST00000596121 EP300Q09472 2414 aaPredicted RBP11.55□□□□□ -0.56
VRK3-210ENST00000596121 C2CD4BA6NLJ0 364 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 TMCO5BA8MYB1 307 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 PAGE1O75459 146 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 ENDOD1O94919 500 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 APOEP02649 317 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 CYBBP04839 570 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 RRM1P23921 792 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 CASP14P31944 242 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 CCR1P32246 355 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 GBP1P32455 592 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 CD70P32970 193 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 GSCP56915 257 aaPredicted RBP11.55□□□□□ -0.56
VRK3-210ENST00000596121 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
VRK3-210ENST00000596121 AUHQ13825 339 aaKnown RBP11.55□□□□□ -0.56
VRK3-210ENST00000596121 CRY1Q16526 586 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 C15orf59Q2T9L4 293 aaPredicted RBP11.55□□□□□ -0.56
VRK3-210ENST00000596121 FSCBQ5H9T9 825 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 PPP1R15BQ5SWA1 713 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 FBXL22Q6P050 247 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 ARCQ7LC44 396 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 ADIPOR2Q86V24 386 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 CIR1Q86X95 450 aaPredicted RBP11.55□□□□□ -0.56
VRK3-210ENST00000596121 MCOLN2Q8IZK6 566 aa11.55□□□□□ -0.56
VRK3-210ENST00000596121 LGI2Q8N0V4 545 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms