RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 ERLEC1Q96DZ1 483 aa18.66■□□□□ 0.58
HOMER3-208ENST00000595756 HSFY1Q96LI6 401 aa18.66■□□□□ 0.58
HOMER3-208ENST00000595756 FAM81BQ96LP2 452 aa18.66■□□□□ 0.58
HOMER3-208ENST00000595756 ZSWIM1Q9BR11 485 aa18.66■□□□□ 0.58
HOMER3-208ENST00000595756 IRX2Q9BZI1 471 aaPredicted RBP18.66■□□□□ 0.58
HOMER3-208ENST00000595756 PRDM16Q9HAZ2 1276 aa18.66■□□□□ 0.58
HOMER3-208ENST00000595756 CD93Q9NPY3 652 aa18.66■□□□□ 0.58
HOMER3-208ENST00000595756 FANCLQ9NW38 375 aa18.66■□□□□ 0.58
HOMER3-208ENST00000595756 ELOVL2Q9NXB9 296 aa18.66■□□□□ 0.58
HOMER3-208ENST00000595756 SFMBT1Q9UHJ3 866 aa18.66■□□□□ 0.58
HOMER3-208ENST00000595756 SLC6A14Q9UN76 642 aa18.66■□□□□ 0.58
HOMER3-208ENST00000595756 MSI1O43347 362 aaKnown RBP18.65■□□□□ 0.58
HOMER3-208ENST00000595756 NDUFS2O75306 463 aa18.65■□□□□ 0.58
HOMER3-208ENST00000595756 FBXO21O94952 628 aa18.65■□□□□ 0.58
HOMER3-208ENST00000595756 IGLV3-27P01718 113 aa18.65■□□□□ 0.58
HOMER3-208ENST00000595756 CDK11BP21127 795 aaKnown RBP18.65■□□□□ 0.58
HOMER3-208ENST00000595756 BRD2P25440 801 aaKnown RBP18.65■□□□□ 0.58
HOMER3-208ENST00000595756 CD6P30203 668 aa18.65■□□□□ 0.58
HOMER3-208ENST00000595756 MAPK8P45983 427 aa18.65■□□□□ 0.58
HOMER3-208ENST00000595756 RGS7P49802 495 aa18.65■□□□□ 0.58
HOMER3-208ENST00000595756 TPM4P67936 248 aa18.65■□□□□ 0.58
HOMER3-208ENST00000595756 GFPT1Q06210 699 aaPredicted RBP18.65■□□□□ 0.58
HOMER3-208ENST00000595756 VWA3BQ502W6 1294 aa18.65■□□□□ 0.58
HOMER3-208ENST00000595756 ADGRF1Q5T601 910 aa18.65■□□□□ 0.58
HOMER3-208ENST00000595756 GBP6Q6ZN66 633 aa18.65■□□□□ 0.58
HOMER3-208ENST00000595756 DEFB119Q8N690 84 aa18.65■□□□□ 0.58
HOMER3-208ENST00000595756 AOPEPQ8N6M6 819 aa18.65■□□□□ 0.58
HOMER3-208ENST00000595756 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.65■□□□□ 0.58
HOMER3-208ENST00000595756 ZNF419Q96HQ0 510 aaPredicted RBP18.65■□□□□ 0.58
HOMER3-208ENST00000595756 CIPCQ9C0C6 399 aa18.65■□□□□ 0.58
HOMER3-208ENST00000595756 MKRN2Q9H000 416 aaKnown RBP18.65■□□□□ 0.58
HOMER3-208ENST00000595756 NDST4Q9H3R1 872 aa18.65■□□□□ 0.58
HOMER3-208ENST00000595756 SUSD2Q9UGT4 822 aa18.65■□□□□ 0.58
HOMER3-208ENST00000595756 UPK3BL1B0FP48 263 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 UPK3BL2E5RIL1 263 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 RNF225M0QZC1 329 aaPredicted RBP18.64■□□□□ 0.57
HOMER3-208ENST00000595756 GIPC1O14908 333 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 TIMM44O43615 452 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 SYNCRIPO60506 623 aaKnown RBP18.64■□□□□ 0.57
HOMER3-208ENST00000595756 LTFP02788 710 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 NCAM1P13591 858 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 HLA-FP30511 346 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 MEA1Q16626 185 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 ST3GAL2Q16842 350 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 UAP1L1Q3KQV9 507 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 NUGGCQ68CJ6 796 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 TMEM215Q68D42 235 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 SMYD5Q6GMV2 418 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 ARHGEF19Q8IW93 802 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 GOLGA1Q92805 767 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 CNTN6Q9UQ52 1028 aa18.64■□□□□ 0.57
HOMER3-208ENST00000595756 IRAK2O43187 625 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 GABBR2O75899 941 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 IGLV3-19P01714 112 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 PRKCHP24723 683 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 COPAP53621 1224 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 ATXN3P54252 364 aaPredicted RBP18.63■□□□□ 0.57
HOMER3-208ENST00000595756 ARID5AQ03989 594 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 RING1Q06587 406 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 NCAPHQ15003 741 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 EXOC3L4Q17RC7 722 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 HSP90AA4PQ58FG1 418 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 WDR45BQ5MNZ6 344 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 MPP7Q5T2T1 576 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 SYCP2LQ5T4T6 812 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 SERPINA13PQ6UXR4 307 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 RRAGAQ7L523 313 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 UNC45BQ8IWX7 931 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 AHI1Q8N157 1196 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 ITM2CQ9NQX7 267 aa18.63■□□□□ 0.57
HOMER3-208ENST00000595756 WSB2Q9NYS7 404 aaPredicted RBP18.63■□□□□ 0.57
HOMER3-208ENST00000595756 LRRC10BA6NIK2 292 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 PES1O00541 588 aaKnown RBP18.62■□□□□ 0.57
HOMER3-208ENST00000595756 ARHGAP33O14559 1287 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 SART1O43290 800 aaKnown RBP18.62■□□□□ 0.57
HOMER3-208ENST00000595756 TSPAN3O60637 253 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 EPHX1P07099 455 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 SYPP08247 313 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 C7P10643 843 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 OXTRP30559 389 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 RPL34P49207 117 aaKnown RBP18.62■□□□□ 0.57
HOMER3-208ENST00000595756 SEMA3BQ13214 749 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 NNTQ13423 1086 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 KIAA0907Q7Z7F0 614 aaPredicted RBP18.62■□□□□ 0.57
HOMER3-208ENST00000595756 TMPRSS6Q8IU80 811 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 ZNF557Q8N988 423 aaPredicted RBP18.62■□□□□ 0.57
HOMER3-208ENST00000595756 DEFB124Q8NES8 71 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 CADM4Q8NFZ8 388 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 CLEC4CQ8WTT0 213 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 SORCS1Q8WY21 1168 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 PRCCQ92733 491 aaPredicted RBP18.62■□□□□ 0.57
HOMER3-208ENST00000595756 AZIN2Q96A70 460 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 TMA16Q96EY4 203 aaKnown RBP18.62■□□□□ 0.57
HOMER3-208ENST00000595756 SIPA1Q96FS4 1042 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 TOE1Q96GM8 510 aaKnown RBP18.62■□□□□ 0.57
HOMER3-208ENST00000595756 KREMEN1Q96MU8 473 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 INTS2Q9H0H0 1204 aaKnown RBP18.62■□□□□ 0.57
HOMER3-208ENST00000595756 SLC32A1Q9H598 525 aa18.62■□□□□ 0.57
HOMER3-208ENST00000595756 LIMA1Q9UHB6 759 aaKnown RBP18.62■□□□□ 0.57
HOMER3-208ENST00000595756 GGA2Q9UJY4 613 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms