RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 FBXW11Q9UKB1 542 aa20.34■□□□□ 0.85
MBD3-209ENST00000592012 DNAJC8O75937 253 aaPredicted RBP20.33■□□□□ 0.85
MBD3-209ENST00000592012 LTFP02788 710 aa20.33■□□□□ 0.85
MBD3-209ENST00000592012 ODC1P11926 461 aa20.33■□□□□ 0.85
MBD3-209ENST00000592012 CAP1Q01518 475 aa20.33■□□□□ 0.85
MBD3-209ENST00000592012 SLC20A2Q08357 652 aa20.33■□□□□ 0.85
MBD3-209ENST00000592012 SEMA3BQ13214 749 aa20.33■□□□□ 0.85
MBD3-209ENST00000592012 PAN2Q504Q3 1202 aaKnown RBP20.33■□□□□ 0.85
MBD3-209ENST00000592012 FAM133BQ5BKY9 247 aaKnown RBP20.33■□□□□ 0.85
MBD3-209ENST00000592012 CTAGE3PQ8IX95 158 aa20.33■□□□□ 0.85
MBD3-209ENST00000592012 COLGALT1Q8NBJ5 622 aa20.33■□□□□ 0.85
MBD3-209ENST00000592012 RMDN2Q96LZ7 410 aa20.33■□□□□ 0.85
MBD3-209ENST00000592012 ACBD6Q9BR61 282 aa20.33■□□□□ 0.85
MBD3-209ENST00000592012 PRDM12Q9H4Q4 367 aa20.33■□□□□ 0.85
MBD3-209ENST00000592012 ZNF180Q9UJW8 692 aa20.33■□□□□ 0.85
MBD3-209ENST00000592012 MAD1L1Q9Y6D9 718 aa20.33■□□□□ 0.85
MBD3-209ENST00000592012 EDF1O60869 148 aaKnown RBP20.32■□□□□ 0.84
MBD3-209ENST00000592012 RASSF9O75901 435 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 UBOX5O94941 541 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 BRCC3P46736 316 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 CDK16Q00536 496 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 TTC39BQ5VTQ0 682 aaPredicted RBP20.32■□□□□ 0.84
MBD3-209ENST00000592012 RNF43Q68DV7 783 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 TP53INP2Q8IXH6 220 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 FITM2Q8N6M3 262 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 MYLPFQ96A32 169 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 ADAM2Q99965 735 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 TDRD15B5MCY1 1934 aaKnown RBP20.32■□□□□ 0.84
MBD3-209ENST00000592012 RNF103O00237 685 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 OPHN1O60890 802 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 CYP11A1P05108 521 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 IBSPP21815 317 aaPredicted RBP20.32■□□□□ 0.84
MBD3-209ENST00000592012 WASHC5Q12768 1159 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 SEPT7Q16181 437 aaKnown RBP20.32■□□□□ 0.84
MBD3-209ENST00000592012 CCNYQ8ND76 341 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 GSDMBQ8TAX9 411 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 VPS11Q9H270 941 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 HAUS2Q9NVX0 235 aa20.32■□□□□ 0.84
MBD3-209ENST00000592012 LPXNO60711 386 aa20.31■□□□□ 0.84
MBD3-209ENST00000592012 PYGBP11216 843 aa20.31■□□□□ 0.84
MBD3-209ENST00000592012 SARNPP82979 210 aaKnown RBP20.31■□□□□ 0.84
MBD3-209ENST00000592012 TRMT10BQ6PF06 316 aaKnown RBP20.31■□□□□ 0.84
MBD3-209ENST00000592012 GBP7Q8N8V2 638 aaPredicted RBP20.31■□□□□ 0.84
MBD3-209ENST00000592012 COLEC11Q9BWP8 271 aa20.31■□□□□ 0.84
MBD3-209ENST00000592012 RXFP1Q9HBX9 757 aa20.31■□□□□ 0.84
MBD3-209ENST00000592012 SLC40A1Q9NP59 571 aa20.31■□□□□ 0.84
MBD3-209ENST00000592012 DDIT4Q9NX09 232 aa20.31■□□□□ 0.84
MBD3-209ENST00000592012 RRN3Q9NYV6 651 aa20.31■□□□□ 0.84
MBD3-209ENST00000592012 F5H423 210 aaPredicted RBP20.31■□□□□ 0.84
MBD3-209ENST00000592012 PPP1R12AO14974 1030 aaPredicted RBP20.31■□□□□ 0.84
MBD3-209ENST00000592012 STK10O94804 968 aaKnown RBP20.31■□□□□ 0.84
MBD3-209ENST00000592012 MLNP12872 115 aa20.31■□□□□ 0.84
MBD3-209ENST00000592012 ERCC2P18074 760 aa20.31■□□□□ 0.84
MBD3-209ENST00000592012 NEK3P51956 506 aa20.31■□□□□ 0.84
MBD3-209ENST00000592012 ECHDC2Q86YB7 292 aa20.31■□□□□ 0.84
MBD3-209ENST00000592012 PDCD7Q8N8D1 485 aaKnown RBP20.31■□□□□ 0.84
MBD3-209ENST00000592012 EDEM1Q92611 657 aa20.31■□□□□ 0.84
MBD3-209ENST00000592012 PCDHA11Q9Y5I1 949 aa20.31■□□□□ 0.84
MBD3-209ENST00000592012 M0QZQ0 153 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 SNRPAP09012 282 aaKnown RBP20.3■□□□□ 0.84
MBD3-209ENST00000592012 DHRS4L1P0CG22 281 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 BDNFP23560 247 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 ETV4P43268 484 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 HCAR3P49019 387 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 INTS6LQ5JSJ4 861 aaKnown RBP20.3■□□□□ 0.84
MBD3-209ENST00000592012 PM20D1Q6GTS8 502 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 METTL23Q86XA0 190 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 APOPT1Q96IL0 206 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 PKMYT1Q99640 499 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 FERMT1Q9BQL6 677 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 CEP41Q9BYV8 373 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 EIF2B3Q9NR50 452 aaKnown RBP20.3■□□□□ 0.84
MBD3-209ENST00000592012 TRMT13Q9NUP7 481 aaKnown RBP20.3■□□□□ 0.84
MBD3-209ENST00000592012 TMLHEQ9NVH6 421 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 ABT1Q9ULW3 272 aaKnown RBP20.3■□□□□ 0.84
MBD3-209ENST00000592012 NUP205Q92621 2012 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 WDR91A4D1P6 747 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 FAM159BA6NKW6 160 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 TRIM49D1C9J1S8 452 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 UGT1A9O60656 530 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 KRT37O76014 449 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 PRKAR2AP13861 404 aaKnown RBP20.3■□□□□ 0.84
MBD3-209ENST00000592012 CST5P28325 142 aaPredicted RBP20.3■□□□□ 0.84
MBD3-209ENST00000592012 HNRNPH1P31943 449 aaKnown RBP20.3■□□□□ 0.84
MBD3-209ENST00000592012 GRIK3Q13003 919 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 TUSC3Q13454 348 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 PARP6Q2NL67 630 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 LRRC8BQ6P9F7 803 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 CYS1Q717R9 158 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 ZNF567Q8N184 647 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 HASPINQ8TF76 798 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 PGBD4Q96DM1 585 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 OXNAD1Q96HP4 312 aaPredicted RBP20.3■□□□□ 0.84
MBD3-209ENST00000592012 UGT1A7Q9HAW7 530 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 UGT1A10Q9HAW8 530 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 UGT1A8Q9HAW9 530 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 MOCS1Q9NZB8 636 aa20.3■□□□□ 0.84
MBD3-209ENST00000592012 TMEM88BA6NKF7 163 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 F9P00740 461 aa20.29■□□□□ 0.84
MBD3-209ENST00000592012 BNIP1Q12981 228 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms