RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 A0A1W2PQF6 199 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 FAM187AA6NFU0 413 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 MEI4A8MW99 385 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 MAPK13O15264 365 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 TIMM44O43615 452 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 ASS1P00966 412 aaKnown RBP9.9□□□□□ -0.82
BRCA1-226ENST00000591534 NR3C1P04150 777 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 RARGP13631 454 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 CCDC130P13994 396 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 SPINK2P20155 84 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 ACO1P21399 889 aaKnown RBP9.9□□□□□ -0.82
BRCA1-226ENST00000591534 RPL13P26373 211 aaKnown RBP9.9□□□□□ -0.82
BRCA1-226ENST00000591534 ADORA2BP29275 332 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 CD6P30203 668 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 WASP42768 502 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 NDUFA8P51970 172 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 ARID5AQ03989 594 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 ENPEPQ07075 957 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 EGFLAMQ63HQ2 1017 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 CEP135Q66GS9 1140 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 KIAA1211LQ6NV74 962 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 SASS6Q6UVJ0 657 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 IL27RAQ6UWB1 636 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 KIAA1324Q6UXG2 1013 aaKnown RBP9.9□□□□□ -0.82
BRCA1-226ENST00000591534 INTS8Q75QN2 995 aaKnown RBP9.9□□□□□ -0.82
BRCA1-226ENST00000591534 SV2AQ7L0J3 742 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 ALDH16A1Q8IZ83 802 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 LINC00528Q8N1L1 170 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 ZNF276Q8N554 614 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 DEFB119Q8N690 84 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 CADM4Q8NFZ8 388 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 GATA6Q92908 595 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 CYFIP2Q96F07 1278 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 ZNF419Q96HQ0 510 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-226ENST00000591534 FAM49BQ9NUQ9 324 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 CLIC5Q9NZA1 410 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 NAGPAQ9UK23 515 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 STRIP2Q9ULQ0 834 aa9.9□□□□□ -0.82
BRCA1-226ENST00000591534 CHD6Q8TD26 2715 aa9.9□□□□□ -0.83
BRCA1-226ENST00000591534 A0A1B0GTW7 788 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 SPAARA0A1B0GVQ0 90 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 ANTXRLA6NF34 631 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 CYP26A1O43174 497 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 SPINT1O43278 529 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 HYAL3O43820 417 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-226ENST00000591534 STX10O60499 249 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 ZNF202O95125 648 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 VNN1O95497 513 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 TBX18O95935 607 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 ACADMP11310 421 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 VAMP7P51809 220 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 TPM4P67936 248 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 INCA1Q0VD86 236 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 STK4Q13043 487 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 EIF4HQ15056 248 aaKnown RBP9.89□□□□□ -0.83
BRCA1-226ENST00000591534 TRIP6Q15654 476 aaKnown RBP9.89□□□□□ -0.83
BRCA1-226ENST00000591534 CAVIN1Q6NZI2 390 aaKnown RBP9.89□□□□□ -0.83
BRCA1-226ENST00000591534 CLEC20AQ6ZU45 233 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 RSRC2Q7L4I2 434 aaKnown RBP9.89□□□□□ -0.83
BRCA1-226ENST00000591534 CCDC186Q7Z3E2 898 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 C12orf29Q8N999 325 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 KIAA0895Q8NCT3 520 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 ZMIZ2Q8NF64 920 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 FAXDC2Q96IV6 333 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 MRGPRX1Q96LB2 322 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 SDCBP2Q9H190 292 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 CLSTN2Q9H4D0 955 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 PRDM16Q9HAZ2 1276 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.89□□□□□ -0.83
BRCA1-226ENST00000591534 APOBEC2Q9Y235 224 aaKnown RBP9.89□□□□□ -0.83
BRCA1-226ENST00000591534 SLC27A6Q9Y2P4 619 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 ATG2BQ96BY7 2078 aa9.89□□□□□ -0.83
BRCA1-226ENST00000591534 FRYQ5TBA9 3013 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 A0A1W2PQH9 124 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 FAM221BA6H8Z2 402 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 SRRM3A6NNA2 597 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-226ENST00000591534 PRRT4C9JH25 899 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 GREM1O60565 184 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 BEST1O76090 585 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 CER1O95813 267 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 HLA-DRAP01903 254 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 CISD3P0C7P0 127 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 BMP2P12643 396 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 ASPAP45381 313 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 RNF144AP50876 292 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-226ENST00000591534 KIF11P52732 1056 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 ZNF445P59923 1031 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 C4orf17Q53FE4 359 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 PRICKLE2Q7Z3G6 844 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 MIB1Q86YT6 1006 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 ENGASEQ8NFI3 743 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 PLEKHO2Q8TD55 490 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 PRCCQ92733 491 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-226ENST00000591534 JAKMIP2Q96AA8 810 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 NUP58Q9BVL2 599 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 DUSP16Q9BY84 665 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 SLC2A11Q9BYW1 496 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 UBXN6Q9BZV1 441 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 PHACTR1Q9C0D0 580 aa9.88□□□□□ -0.83
BRCA1-226ENST00000591534 NIF3L1Q9GZT8 377 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms