RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 TTC9BQ8N6N2 239 aa20.12■□□□□ 0.81
SPHK1-207ENST00000590959 KLHL23Q8NBE8 558 aa20.12■□□□□ 0.81
SPHK1-207ENST00000590959 CCDC197Q8NCU1 140 aa20.12■□□□□ 0.81
SPHK1-207ENST00000590959 FAF2Q96CS3 445 aa20.12■□□□□ 0.81
SPHK1-207ENST00000590959 NKX2-4Q9H2Z4 354 aa20.12■□□□□ 0.81
SPHK1-207ENST00000590959 SPG21Q9NZD8 308 aa20.12■□□□□ 0.81
SPHK1-207ENST00000590959 SAE1Q9UBE0 346 aaPredicted RBP20.12■□□□□ 0.81
SPHK1-207ENST00000590959 SCML2Q9UQR0 700 aa20.12■□□□□ 0.81
SPHK1-207ENST00000590959 COLQQ9Y215 455 aaPredicted RBP20.12■□□□□ 0.81
SPHK1-207ENST00000590959 ITGAVP06756 1048 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 HAPLN1P10915 354 aaPredicted RBP20.11■□□□□ 0.81
SPHK1-207ENST00000590959 BMPR1AP36894 532 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 RPL21P46778 160 aaKnown RBP20.11■□□□□ 0.81
SPHK1-207ENST00000590959 MYO9BQ13459 2157 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 OASLQ15646 514 aaKnown RBP20.11■□□□□ 0.81
SPHK1-207ENST00000590959 MON1AQ86VX9 555 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 NTAN1Q96AB6 310 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 SEPT5Q99719 369 aaPredicted RBP20.11■□□□□ 0.81
SPHK1-207ENST00000590959 CERS4Q9HA82 394 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 PLXNA4Q9HCM2 1894 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 WDR6Q9NNW5 1121 aaKnown RBP20.11■□□□□ 0.81
SPHK1-207ENST00000590959 MTMR10Q9NXD2 777 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.11■□□□□ 0.81
SPHK1-207ENST00000590959 RCOR3Q9P2K3 495 aaPredicted RBP20.11■□□□□ 0.81
SPHK1-207ENST00000590959 ASIC3Q9UHC3 531 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 SLC27A5Q9Y2P5 690 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 APOL1O14791 398 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 RGS16O15492 202 aaPredicted RBP20.11■□□□□ 0.81
SPHK1-207ENST00000590959 FGF18O76093 207 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 RARGP13631 454 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 ATP5DP30049 168 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 CTNNB1P35222 781 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 ROR1Q01973 937 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 XRCC4Q13426 336 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 EFHC2Q5JST6 749 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 DENND5BQ6ZUT9 1274 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 CCDC89Q8N998 374 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 KCTD15Q96SI1 283 aaPredicted RBP20.11■□□□□ 0.81
SPHK1-207ENST00000590959 MYCBPQ99417 103 aaPredicted RBP20.11■□□□□ 0.81
SPHK1-207ENST00000590959 SLC40A1Q9NP59 571 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 NEU2Q9Y3R4 380 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 PCDHB12Q9Y5F1 795 aa20.11■□□□□ 0.81
SPHK1-207ENST00000590959 MYO7AQ13402 2215 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 WDR27A2RRH5 827 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 VNN2O95498 520 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 TGM2P21980 687 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 OR1D2P34982 312 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 ADRA1BP35368 520 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 ARL4AP40617 200 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 GLUD2P49448 558 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 RPL10AP62906 217 aaKnown RBP20.1■□□□□ 0.81
SPHK1-207ENST00000590959 SCAPQ12770 1279 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 DUSP4Q13115 394 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 ARL13BQ3SXY8 428 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 SLC9A4Q6AI14 798 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 ZDHHC24Q6UX98 284 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 TRMT10CQ7L0Y3 403 aaKnown RBP20.1■□□□□ 0.81
SPHK1-207ENST00000590959 TAC4Q86UU9 113 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 ARHGAP18Q8N392 663 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 PQLC3Q8N755 202 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 PCDH19Q8TAB3 1148 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 CCHCR1Q8TD31 782 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 DQX1Q8TE96 717 aaKnown RBP20.1■□□□□ 0.81
SPHK1-207ENST00000590959 SGSM3Q96HU1 749 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 SPATA17Q96L03 361 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 HERC2P3Q9BVR0 1158 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 CRISPLD1Q9H336 500 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 ALG13Q9NP73 1137 aaKnown RBP20.1■□□□□ 0.81
SPHK1-207ENST00000590959 AAASQ9NRG9 546 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 IL37Q9NZH6 218 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 FBXW11Q9UKB1 542 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 COL4A4P53420 1690 aaPredicted RBP20.1■□□□□ 0.81
SPHK1-207ENST00000590959 TRANK1O15050 2925 aa20.1■□□□□ 0.81
SPHK1-207ENST00000590959 C2CD2LO14523 706 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 MCF2LO15068 1137 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 RTN3O95197 1032 aaPredicted RBP20.09■□□□□ 0.81
SPHK1-207ENST00000590959 PECAM1P16284 738 aaPredicted RBP20.09■□□□□ 0.81
SPHK1-207ENST00000590959 ZFXP17010 805 aaPredicted RBP20.09■□□□□ 0.81
SPHK1-207ENST00000590959 PPM1AP35813 382 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 CXCR3P49682 368 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 DSG1Q02413 1049 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 SCD5Q86SK9 330 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 DDX53Q86TM3 631 aaKnown RBP20.09■□□□□ 0.81
SPHK1-207ENST00000590959 ALLCQ8N6M5 410 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 PLD5Q8N7P1 536 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 CSPG4P5Q96PW8 444 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 EPB41L4BQ9H329 900 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 WDCPQ9H6R7 721 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 GRHL1Q9NZI5 618 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 ADAM12O43184 909 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 SOAT2O75908 522 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 RPL17P18621 184 aaKnown RBP20.09■□□□□ 0.81
SPHK1-207ENST00000590959 YWHAQP27348 245 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 PLTPP55058 493 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 EIF3EP60228 445 aaKnown RBP20.09■□□□□ 0.81
SPHK1-207ENST00000590959 CALCOCO2Q13137 446 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 NOMO1Q15155 1222 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 SNCBQ16143 134 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 PYROXD2Q8N2H3 581 aa20.09■□□□□ 0.81
SPHK1-207ENST00000590959 STKLD1Q8NE28 680 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms