RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 BNIP3LO60238 219 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 LYPLA1O75608 230 aaPredicted RBP17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 TCF4P15884 667 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 PTK2BQ14289 1009 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 TAF5Q15542 800 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 IMPG1Q17R60 797 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 NMRK1Q9NWW6 199 aa17.56■□□□□ 0.4
SMARCA4-215ENST00000590574 MAGEB16A2A368 324 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 LGALS2P05162 132 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 CSHL1Q14406 222 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 KIAA0319LQ8IZA0 1049 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 RNF148Q8N7C7 305 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 CD101Q93033 1021 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 NMD3Q96D46 503 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 SLCO1B7G3V0H7 640 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 NCAM2O15394 837 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 ANPEPP15144 967 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 ABCE1P61221 599 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 IYDQ6PHW0 289 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 OR52K1Q8NGK4 314 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 DHX33Q9H6R0 707 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 PCDHGC3Q9UN70 934 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 UBR2Q8IWV8 1755 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 CCL15-CCL14A0A0B4J2E2 113 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 VGLL4Q14135 290 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 CCL15Q16663 113 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 DRICH1Q6PGQ1 229 aaPredicted RBP17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 UNC5AQ6ZN44 842 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 SNX32Q86XE0 403 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 URGCPQ8TCY9 931 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 NMUR2Q9GZQ4 415 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 RNPEPQ9H4A4 650 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 NMRAL1Q9HBL8 299 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 SNX13Q9Y5W8 968 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 C6orf222P0C671 652 aaPredicted RBP17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 CDK7P50613 346 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 CCDC88AQ3V6T2 1871 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 RINLQ6ZS11 566 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 ARCQ7LC44 396 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 DEFB132Q7Z7B7 95 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 EGFL8Q99944 293 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 PCDH18Q9HCL0 1135 aa17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 CORO1CQ9ULV4 474 aaPredicted RBP17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 TIMM13Q9Y5L4 95 aaPredicted RBP17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 MAFBQ9Y5Q3 323 aaPredicted RBP17.55■□□□□ 0.4
SMARCA4-215ENST00000590574 ZMPSTE24O75844 475 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 CPB1P15086 417 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 HDAC4P56524 1084 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 SLC39A4Q6P5W5 647 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 APBA2Q99767 749 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 NCKIPSDQ9NZQ3 722 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 NME5P56597 212 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 CDH17Q12864 832 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 PRKAA1Q13131 559 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 PPP1R26Q5T8A7 1209 aaPredicted RBP17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 EMC10Q5UCC4 262 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 ULK2Q8IYT8 1036 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 NETO2Q8NC67 525 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 LGMNQ99538 433 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 DENND2DQ9H6A0 471 aaPredicted RBP17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 DDX43Q9NXZ2 648 aaKnown RBP17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 PLLPQ9Y342 182 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 CLUHO75153 1309 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 SERPINA6P08185 405 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 GOT1P17174 413 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 KLRC2P26717 231 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 PLPPR4Q7Z2D5 763 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 HIC2Q96JB3 615 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 CNDP1Q96KN2 507 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 SORCS3Q9UPU3 1222 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 SNCAIPQ9Y6H5 919 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 BIRC5O15392 142 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 CLPTM1O96005 669 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 PPM1FP49593 454 aaPredicted RBP17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 ULK4Q96C45 1275 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 ELOVL4Q9GZR5 314 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 CCDC90BQ9GZT6 254 aa17.54■□□□□ 0.4
SMARCA4-215ENST00000590574 C17orf102A2RUQ5 167 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 TPST1O60507 370 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 ENPEPQ07075 957 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 FAR2Q96K12 515 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 NAV1Q8NEY1 1877 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 B4GALT4O60513 344 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 ANKS1BQ7Z6G8 1248 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 CDRT15Q96T59 188 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 NIFKQ9BYG3 293 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 ADGRA2Q96PE1 1338 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 NDUFS3O75489 264 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 HSPA1AP0DMV8 641 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 HSPA1BP0DMV9 641 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 PSMC3P17980 439 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 FNIP1Q8TF40 1166 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 OPTNQ96CV9 577 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 SSU72Q9NP77 194 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 MORF4L1Q9UBU8 362 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 PRR5-ARHGAP8B1AHC4 643 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 ODC1P11926 461 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 ARHGAP8P85298 464 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 GRAMD4Q6IC98 578 aa17.53■□□□□ 0.4
SMARCA4-215ENST00000590574 EFCAB3Q8N7B9 438 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms