RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ZNF366Q8N895 744 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 KIAA0895Q8NCT3 520 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 FCRL3Q96P31 734 aaPredicted RBP18.14■□□□□ 0.49
RETREG3-210ENST00000590541 SLC2A11Q9BYW1 496 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 DCLK3Q9C098 648 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 BTBD1Q9H0C5 482 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 DMAC2Q9NW81 257 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 CLIC5Q9NZA1 410 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 USP3Q9Y6I4 520 aa18.14■□□□□ 0.49
RETREG3-210ENST00000590541 A0A1B0GTQ1 180 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 TIMM44O43615 452 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 FSBPO95073 299 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 CYBBP04839 570 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 RALAP11233 206 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 P4HA1P13674 534 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 HNF1BP35680 557 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 EFEMP1Q12805 493 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 SGSM1Q2NKQ1 1148 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 INAVAQ3KP66 663 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 SPOPLQ6IQ16 392 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 KRBA2Q6ZNG9 492 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 GATAD2AQ86YP4 633 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 FAM217AQ8IXS0 508 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 DDI1Q8WTU0 396 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 CYFIP2Q96F07 1278 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 KCTD10Q9H3F6 313 aa18.13■□□□□ 0.49
RETREG3-210ENST00000590541 CYSRT1A8MQ03 144 aa18.12■□□□□ 0.49
RETREG3-210ENST00000590541 ENC1O14682 589 aa18.12■□□□□ 0.49
RETREG3-210ENST00000590541 CALUO43852 315 aaPredicted RBP18.12■□□□□ 0.49
RETREG3-210ENST00000590541 DFNA5O60443 496 aa18.12■□□□□ 0.49
RETREG3-210ENST00000590541 RFPL3O75679 317 aa18.12■□□□□ 0.49
RETREG3-210ENST00000590541 RPS14P62263 151 aaKnown RBP18.12■□□□□ 0.49
RETREG3-210ENST00000590541 DLG4P78352 724 aa18.12■□□□□ 0.49
RETREG3-210ENST00000590541 ARID5AQ03989 594 aa18.12■□□□□ 0.49
RETREG3-210ENST00000590541 TARDBPQ13148 414 aaKnown RBP eCLIP18.12■□□□□ 0.49
RETREG3-210ENST00000590541 DNAJC3Q13217 504 aa18.12■□□□□ 0.49
RETREG3-210ENST00000590541 PRAMEF14Q5SWL7 426 aa18.12■□□□□ 0.49
RETREG3-210ENST00000590541 PCSK4Q6UW60 755 aa18.12■□□□□ 0.49
RETREG3-210ENST00000590541 ADAT2Q7Z6V5 191 aaKnown RBP18.12■□□□□ 0.49
RETREG3-210ENST00000590541 CYB5D2Q8WUJ1 264 aa18.12■□□□□ 0.49
RETREG3-210ENST00000590541 CDK5RAP1Q96SZ6 601 aaKnown RBP18.12■□□□□ 0.49
RETREG3-210ENST00000590541 TRAF3IP3Q9Y228 551 aa18.12■□□□□ 0.49
RETREG3-210ENST00000590541 AK5Q9Y6K8 562 aa18.12■□□□□ 0.49
RETREG3-210ENST00000590541 MAPK13O15264 365 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 RRP8O43159 456 aaKnown RBP18.11■□□□□ 0.49
RETREG3-210ENST00000590541 ZNF202O95125 648 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 ASS1P00966 412 aaKnown RBP18.11■□□□□ 0.49
RETREG3-210ENST00000590541 IGHV4-34P06331 123 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 HOXD9P28356 352 aaPredicted RBP18.11■□□□□ 0.49
RETREG3-210ENST00000590541 HLA-FP30511 346 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 BCAT1P54687 386 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 ZBTB16Q05516 673 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 INCA1Q0VD86 236 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 DPYDQ12882 1025 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 RTP5Q14D33 572 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 SHBQ15464 509 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 NFIL3Q16649 462 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 ZACNQ401N2 412 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 FNDC3BQ53EP0 1204 aaKnown RBP18.11■□□□□ 0.49
RETREG3-210ENST00000590541 SNIP1Q8TAD8 396 aaKnown RBP18.11■□□□□ 0.49
RETREG3-210ENST00000590541 TMC2Q8TDI7 906 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 CNDP2Q96KP4 475 aaKnown RBP18.11■□□□□ 0.49
RETREG3-210ENST00000590541 NRSN2Q9GZP1 204 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 SGK2Q9HBY8 427 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 PRSS16Q9NQE7 514 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 FRMD4BQ9Y2L6 1034 aa18.11■□□□□ 0.49
RETREG3-210ENST00000590541 PTPRQQ9UMZ3 2332 aa18.1■□□□□ 0.49
RETREG3-210ENST00000590541 KNTC1P50748 2209 aa18.1■□□□□ 0.49
RETREG3-210ENST00000590541 TP53BP1Q12888 1972 aaPredicted RBP18.1■□□□□ 0.49
RETREG3-210ENST00000590541 PLXNA2O75051 1894 aa18.1■□□□□ 0.49
RETREG3-210ENST00000590541 GOLGA6L4A6NEF3 574 aa18.1■□□□□ 0.49
RETREG3-210ENST00000590541 IKBKBO14920 756 aa18.1■□□□□ 0.49
RETREG3-210ENST00000590541 VILLO15195 856 aa18.1■□□□□ 0.49
RETREG3-210ENST00000590541 LDOC1O95751 146 aaPredicted RBP18.1■□□□□ 0.49
RETREG3-210ENST00000590541 DNTTP04053 509 aa18.1■□□□□ 0.49
RETREG3-210ENST00000590541 NR3C1P04150 777 aa18.1■□□□□ 0.49
RETREG3-210ENST00000590541 C1SP09871 688 aa18.1■□□□□ 0.49
RETREG3-210ENST00000590541 ACADVLP49748 655 aa18.1■□□□□ 0.49
RETREG3-210ENST00000590541 RACK1P63244 317 aaKnown RBP18.1■□□□□ 0.49
RETREG3-210ENST00000590541 SAP25Q8TEE9 199 aa18.1■□□□□ 0.49
RETREG3-210ENST00000590541 TAF4BQ92750 862 aa18.1■□□□□ 0.49
RETREG3-210ENST00000590541 SLC6A18Q96N87 628 aa18.1■□□□□ 0.49
RETREG3-210ENST00000590541 ELF4Q99607 663 aaPredicted RBP18.1■□□□□ 0.49
RETREG3-210ENST00000590541 ACE2Q9BYF1 805 aaPredicted RBP18.1■□□□□ 0.49
RETREG3-210ENST00000590541 MARCH2Q9P0N8 246 aa18.1■□□□□ 0.49
RETREG3-210ENST00000590541 PLA2G4CQ9UP65 541 aa18.1■□□□□ 0.49
RETREG3-210ENST00000590541 TEX51A0A1B0GUA7 166 aa18.09■□□□□ 0.49
RETREG3-210ENST00000590541 SLC12A8A0AV02 714 aa18.09■□□□□ 0.49
RETREG3-210ENST00000590541 WNT1P04628 370 aa18.09■□□□□ 0.49
RETREG3-210ENST00000590541 CDK4P11802 303 aa18.09■□□□□ 0.49
RETREG3-210ENST00000590541 RPL13P26373 211 aaKnown RBP18.09■□□□□ 0.49
RETREG3-210ENST00000590541 C21orf59P57076 290 aa18.09■□□□□ 0.49
RETREG3-210ENST00000590541 ENPEPQ07075 957 aa18.09■□□□□ 0.49
RETREG3-210ENST00000590541 PDE4CQ08493 712 aa18.09■□□□□ 0.49
RETREG3-210ENST00000590541 MPPE1Q53F39 396 aa18.09■□□□□ 0.49
RETREG3-210ENST00000590541 HES3Q5TGS1 186 aa18.09■□□□□ 0.49
RETREG3-210ENST00000590541 KIAA0895LQ68EN5 471 aa18.09■□□□□ 0.49
RETREG3-210ENST00000590541 FBXL19Q6PCT2 694 aa18.09■□□□□ 0.49
RETREG3-210ENST00000590541 SV2AQ7L0J3 742 aa18.09■□□□□ 0.49
RETREG3-210ENST00000590541 CHST9Q7L1S5 443 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms