RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 CCDC122Q5T0U0 273 aa22.35■■□□□ 1.17
R3HDM4-206ENST00000590454 ALKBH5Q6P6C2 394 aaKnown RBP22.35■■□□□ 1.17
R3HDM4-206ENST00000590454 TTC8Q8TAM2 541 aa22.35■■□□□ 1.17
R3HDM4-206ENST00000590454 GAB3Q8WWW8 586 aa22.35■■□□□ 1.17
R3HDM4-206ENST00000590454 PANX2Q96RD6 677 aa22.35■■□□□ 1.17
R3HDM4-206ENST00000590454 GTSE1Q9NYZ3 720 aa22.35■■□□□ 1.17
R3HDM4-206ENST00000590454 IMPACTQ9P2X3 320 aa22.35■■□□□ 1.17
R3HDM4-206ENST00000590454 STRIP2Q9ULQ0 834 aa22.35■■□□□ 1.17
R3HDM4-206ENST00000590454 EPN2O95208 641 aa22.34■■□□□ 1.17
R3HDM4-206ENST00000590454 ARSAP15289 507 aa22.34■■□□□ 1.17
R3HDM4-206ENST00000590454 TNK2Q07912 1038 aa22.34■■□□□ 1.17
R3HDM4-206ENST00000590454 CCDC6Q16204 474 aa22.34■■□□□ 1.17
R3HDM4-206ENST00000590454 SLC18A3Q16572 532 aa22.34■■□□□ 1.17
R3HDM4-206ENST00000590454 STPG1Q5TH74 334 aa22.34■■□□□ 1.17
R3HDM4-206ENST00000590454 C3orf20Q8ND61 904 aa22.34■■□□□ 1.17
R3HDM4-206ENST00000590454 FAM83CQ9BQN1 747 aa22.34■■□□□ 1.17
R3HDM4-206ENST00000590454 PACSIN1Q9BY11 444 aa22.34■■□□□ 1.17
R3HDM4-206ENST00000590454 RXFP3Q9NSD7 469 aa22.34■■□□□ 1.17
R3HDM4-206ENST00000590454 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.34■■□□□ 1.176e-8■■■■■ 48
R3HDM4-206ENST00000590454 WDR35Q9P2L0 1181 aa22.34■■□□□ 1.17
R3HDM4-206ENST00000590454 CHD8Q9HCK8 2581 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 SYNJ2BP-COX16A0A087WUM0 186 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 CCDC163A0A0D9SF12 145 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 AKR1B10O60218 316 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 RPP40O75818 363 aaKnown RBP22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 TRUB2O95900 331 aaKnown RBP22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 IGLV3-25P01717 112 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 ABCB4P21439 1286 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 FECHP22830 423 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 HOXC13P31276 330 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 NOS2P35228 1153 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 RFC1P35251 1148 aaPredicted RBP22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 MATKP42679 507 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 RAB6CQ53S08 254 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 PPP1R15BQ5SWA1 713 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 DNAJC24Q6P3W2 148 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 BBS7Q8IWZ6 715 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 ZNF653Q96CK0 615 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 VCPIP1Q96JH7 1222 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 CCDC42Q96M95 316 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 NPY6RQ99463 290 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 RAB6CQ9H0N0 254 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 DEF6Q9H4E7 631 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 HPS4Q9NQG7 708 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 COX16Q9P0S2 106 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 RALYQ9UKM9 306 aaKnown RBP22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 SH3BP1Q9Y3L3 701 aa22.33■■□□□ 1.17
R3HDM4-206ENST00000590454 USP24Q9UPU5 2620 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 RALGAPA1Q6GYQ0 2036 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 OTOL1A6NHN0 477 aaPredicted RBP22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 SIGLEC16A6NMB1 481 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 IGLV3-27P01718 113 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 PROS1P07225 676 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 KRT3P12035 628 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 RPL7AP62424 266 aaKnown RBP22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 COG7P83436 770 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 MAMLD1Q13495 774 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 EIF4EBP2Q13542 120 aaPredicted RBP22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 TRIP4Q15650 581 aaPredicted RBP22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 SH3PXD2AQ5TCZ1 1133 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 Q6ZNB5 142 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 HTR3DQ70Z44 454 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 DDX42Q86XP3 938 aaKnown RBP eCLIP22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 TMEM139Q8IV31 216 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 OSCP1Q8WVF1 389 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 RXFP2Q8WXD0 754 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 ARHGEF26Q96DR7 871 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 CFAP57Q96MR6 1250 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 TBCBQ99426 244 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 TRIM62Q9BVG3 475 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 SELENOOQ9BVL4 669 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 THAP2Q9H0W7 228 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 EBF3Q9H4W6 596 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 DUS2Q9NX74 493 aaKnown RBP22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 MYO1AQ9UBC5 1043 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 CNOT8Q9UFF9 292 aaKnown RBP22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 HBS1LQ9Y450 684 aaKnown RBP22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 PCDHGA5Q9Y5G8 931 aa22.32■■□□□ 1.16
R3HDM4-206ENST00000590454 E2F8A0AVK6 867 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 SOWAHDA6NJG2 315 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 C2CD4BA6NLJ0 364 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 IRAK2O43187 625 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 KCNK5O95279 499 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 CORO1AP31146 461 aaKnown RBP22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 SULT1E1P49888 294 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 GALCP54803 685 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 TBX4P57082 545 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 GSE1Q14687 1217 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 EML3Q32P44 896 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 CCDC14Q49A88 953 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 PLA2G2CQ5R387 149 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 PLEKHA7Q6IQ23 1121 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 PPP1R2P3Q6NXS1 205 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 CC2D1AQ6P1N0 951 aaPredicted RBP22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 KBTBD6Q86V97 674 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 NT5C3BQ969T7 300 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 SLC39A13Q96H72 371 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 FCRL2Q96LA5 508 aaPredicted RBP22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 MCEEQ96PE7 176 aa22.31■■□□□ 1.16
R3HDM4-206ENST00000590454 TRIM7Q9C029 511 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms