RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ANKZF1Q9H8Y5 726 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 LMCD1Q9NZU5 365 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 PCYOX1Q9UHG3 505 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 FEZ2Q9UHY8 353 aaPredicted RBP23.03■■□□□ 1.28
ATG4D-209ENST00000588857 TARSL2A2RTX5 802 aaKnown RBP23.02■■□□□ 1.28
ATG4D-209ENST00000588857 C2orf78A6NCI8 922 aa23.02■■□□□ 1.28
ATG4D-209ENST00000588857 TGM2P21980 687 aa23.02■■□□□ 1.28
ATG4D-209ENST00000588857 CDC25CP30307 473 aa23.02■■□□□ 1.28
ATG4D-209ENST00000588857 HCAR3P49019 387 aa23.02■■□□□ 1.28
ATG4D-209ENST00000588857 SEMA3BQ13214 749 aa23.02■■□□□ 1.28
ATG4D-209ENST00000588857 MTA1Q13330 715 aa23.02■■□□□ 1.28
ATG4D-209ENST00000588857 CCDC85BQ15834 202 aaPredicted RBP23.02■■□□□ 1.28
ATG4D-209ENST00000588857 RFX8Q6ZV50 586 aa23.02■■□□□ 1.28
ATG4D-209ENST00000588857 ADGRD2Q7Z7M1 963 aa23.02■■□□□ 1.28
ATG4D-209ENST00000588857 HS6ST3Q8IZP7 471 aa23.02■■□□□ 1.28
ATG4D-209ENST00000588857 MRPS31Q92665 395 aaKnown RBP23.02■■□□□ 1.28
ATG4D-209ENST00000588857 TRPC7Q9HCX4 862 aa23.02■■□□□ 1.28
ATG4D-209ENST00000588857 STIM2Q9P246 746 aa23.02■■□□□ 1.28
ATG4D-209ENST00000588857 SAE1Q9UBE0 346 aaPredicted RBP23.02■■□□□ 1.28
ATG4D-209ENST00000588857 FAM72CH0Y354 149 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 LIASO43766 372 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 XYLBO75191 536 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 RFPL2O75678 378 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 OAS1P00973 400 aaKnown RBP23.01■■□□□ 1.27
ATG4D-209ENST00000588857 IGLV3-27P01718 113 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 MYL4P12829 197 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 AMPD1P23109 780 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 COG7P83436 770 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 SLC7A5Q01650 507 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 OTUD4Q01804 1114 aaKnown RBP23.01■■□□□ 1.27
ATG4D-209ENST00000588857 BYSLQ13895 437 aaKnown RBP23.01■■□□□ 1.27
ATG4D-209ENST00000588857 FAM72AQ5TYM5 149 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 NUGGCQ68CJ6 796 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 FAM72DQ6L9T8 149 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 FAM72BQ86X60 149 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 TMC8Q8IU68 726 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 UNC45BQ8IWX7 931 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 PLD5Q8N7P1 536 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 ACTL9Q8TC94 416 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 GRK7Q8WTQ7 553 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 BTN2A3PQ96KV6 586 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 LRRC3Q9BY71 257 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 ARHGEF4Q9NR80 690 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 SNX10Q9Y5X0 201 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 HCFC2Q9Y5Z7 792 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 DOCK6Q96HP0 2047 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 FGF19O95750 216 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 PTPN2P17706 415 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 KCNJ1P48048 391 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 DRICH1Q6PGQ1 229 aaPredicted RBP23.01■■□□□ 1.27
ATG4D-209ENST00000588857 C1orf228Q6PIY5 440 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 GAREM2Q75VX8 874 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 ATL2Q8NHH9 583 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 C1orf74Q96LT6 269 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 CCDC114Q96M63 670 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 ATXN3LQ9H3M9 355 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 ZDHHC7Q9NXF8 308 aa23.01■■□□□ 1.27
ATG4D-209ENST00000588857 TTI1O43156 1089 aa23■■□□□ 1.27
ATG4D-209ENST00000588857 HEXIM1O94992 359 aaKnown RBP23■■□□□ 1.27
ATG4D-209ENST00000588857 SRGAP2BP0DMP2 458 aa23■■□□□ 1.27
ATG4D-209ENST00000588857 HTR7P34969 479 aa23■■□□□ 1.27
ATG4D-209ENST00000588857 NRIP1P48552 1158 aa23■■□□□ 1.27
ATG4D-209ENST00000588857 LMNB2Q03252 620 aa23■■□□□ 1.27
ATG4D-209ENST00000588857 DPYSQ14117 519 aa23■■□□□ 1.27
ATG4D-209ENST00000588857 DUSP6Q16828 381 aa23■■□□□ 1.27
ATG4D-209ENST00000588857 ACBD5Q5T8D3 534 aaPredicted RBP23■■□□□ 1.27
ATG4D-209ENST00000588857 MICALL1Q8N3F8 863 aa23■■□□□ 1.27
ATG4D-209ENST00000588857 PPP2R3CQ969Q6 453 aa23■■□□□ 1.27
ATG4D-209ENST00000588857 RNF38Q9H0F5 515 aa23■■□□□ 1.27
ATG4D-209ENST00000588857 DNPEPQ9ULA0 475 aa23■■□□□ 1.27
ATG4D-209ENST00000588857 ZNF148Q9UQR1 794 aa23■■□□□ 1.27
ATG4D-209ENST00000588857 HEY1Q9Y5J3 304 aa23■■□□□ 1.27
ATG4D-209ENST00000588857 FAM187AA6NFU0 413 aa22.99■■□□□ 1.27
ATG4D-209ENST00000588857 MCF2LO15068 1137 aa22.99■■□□□ 1.27
ATG4D-209ENST00000588857 LRIG2O94898 1065 aa22.99■■□□□ 1.27
ATG4D-209ENST00000588857 ECEL1O95672 775 aa22.99■■□□□ 1.27
ATG4D-209ENST00000588857 TUBBP07437 444 aa22.99■■□□□ 1.27
ATG4D-209ENST00000588857 MBL2P11226 248 aaPredicted RBP22.99■■□□□ 1.27
ATG4D-209ENST00000588857 PECAM1P16284 738 aaPredicted RBP22.99■■□□□ 1.27
ATG4D-209ENST00000588857 HDCP19113 662 aa22.99■■□□□ 1.27
ATG4D-209ENST00000588857 EPHB2P29323 1055 aa22.99■■□□□ 1.27
ATG4D-209ENST00000588857 GGCXP38435 758 aa22.99■■□□□ 1.27
ATG4D-209ENST00000588857 HARS2P49590 506 aaKnown RBP22.99■■□□□ 1.27
ATG4D-209ENST00000588857 VCPP55072 806 aaKnown RBP22.99■■□□□ 1.27
ATG4D-209ENST00000588857 MLLT6P55198 1093 aaPredicted RBP22.99■■□□□ 1.27
ATG4D-209ENST00000588857 TXNDC8Q6A555 127 aa22.99■■□□□ 1.27
ATG4D-209ENST00000588857 NPNTQ6UXI9 565 aa22.99■■□□□ 1.27
ATG4D-209ENST00000588857 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.99■■□□□ 1.27
ATG4D-209ENST00000588857 NKD2Q969F2 451 aaPredicted RBP22.99■■□□□ 1.27
ATG4D-209ENST00000588857 PLD4Q96BZ4 506 aa22.99■■□□□ 1.27
ATG4D-209ENST00000588857 MRPL38Q96DV4 380 aaKnown RBP22.99■■□□□ 1.27
ATG4D-209ENST00000588857 PARD6BQ9BYG5 372 aa22.99■■□□□ 1.27
ATG4D-209ENST00000588857 HCFC1R1Q9NWW0 138 aa22.99■■□□□ 1.27
ATG4D-209ENST00000588857 DMGDHQ9UI17 866 aaKnown RBP22.99■■□□□ 1.27
ATG4D-209ENST00000588857 XPO7Q9UIA9 1087 aaKnown RBP22.99■■□□□ 1.27
ATG4D-209ENST00000588857 HS3ST4Q9Y661 456 aa22.99■■□□□ 1.27
ATG4D-209ENST00000588857 PRUNE2Q8WUY3 3088 aa22.99■■□□□ 1.27
ATG4D-209ENST00000588857 A0A1W2PRU2 124 aa22.98■■□□□ 1.27
ATG4D-209ENST00000588857 DYNC1I1O14576 645 aa22.98■■□□□ 1.27
ATG4D-209ENST00000588857 GAS8O95995 478 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms