RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ANLNQ9NQW6 1124 aa20.96■□□□□ 0.95
DDX39A-207ENST00000588542 ARHGEF4Q9NR80 690 aa20.96■□□□□ 0.95
DDX39A-207ENST00000588542 DNAJC17Q9NVM6 304 aaKnown RBP20.96■□□□□ 0.95
DDX39A-207ENST00000588542 RAPGEFL1Q9UHV5 662 aa20.96■□□□□ 0.95
DDX39A-207ENST00000588542 CLEC4EQ9ULY5 219 aa20.96■□□□□ 0.95
DDX39A-207ENST00000588542 I6L893 689 aaPredicted RBP20.95■□□□□ 0.94
DDX39A-207ENST00000588542 ATMINO43313 823 aaPredicted RBP20.95■□□□□ 0.94
DDX39A-207ENST00000588542 F9P00740 461 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 CYBBP04839 570 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 APODP05090 189 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 TPM1P09493 284 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 CHRM1P11229 460 aaPredicted RBP20.95■□□□□ 0.94
DDX39A-207ENST00000588542 COL9A1P20849 921 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 GRIA2P42262 883 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 PTPN9P43378 593 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 RPL7AP62424 266 aaKnown RBP20.95■□□□□ 0.94
DDX39A-207ENST00000588542 DEUP1Q05D60 604 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 C15orf59Q2T9L4 293 aaPredicted RBP20.95■□□□□ 0.94
DDX39A-207ENST00000588542 FBXO43Q4G163 708 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 RAB6CQ53S08 254 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 SH3PXD2AQ5TCZ1 1133 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 PLEKHA7Q6IQ23 1121 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 PKN3Q6P5Z2 889 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 C1orf210Q8IVY1 113 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 DDI1Q8WTU0 396 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 RNF34Q969K3 372 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 TMA16Q96EY4 203 aaKnown RBP20.95■□□□□ 0.94
DDX39A-207ENST00000588542 PRICKLE1Q96MT3 831 aaPredicted RBP20.95■□□□□ 0.94
DDX39A-207ENST00000588542 PRMT1Q99873 361 aaKnown RBP20.95■□□□□ 0.94
DDX39A-207ENST00000588542 IER2Q9BTL4 223 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.95■□□□□ 0.94
DDX39A-207ENST00000588542 IRX2Q9BZI1 471 aaPredicted RBP20.95■□□□□ 0.94
DDX39A-207ENST00000588542 RAB6CQ9H0N0 254 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 ARHGEF38Q9NXL2 777 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 NENFQ9UMX5 172 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 DOCK4Q8N1I0 1966 aa20.95■□□□□ 0.94
DDX39A-207ENST00000588542 RNF40O75150 1001 aa20.94■□□□□ 0.94
DDX39A-207ENST00000588542 ADCY5O95622 1261 aa20.94■□□□□ 0.94
DDX39A-207ENST00000588542 ABCB4P21439 1286 aa20.94■□□□□ 0.94
DDX39A-207ENST00000588542 EIF4A3P38919 411 aaKnown RBP20.94■□□□□ 0.94
DDX39A-207ENST00000588542 ATP11AP98196 1134 aa20.94■□□□□ 0.94
DDX39A-207ENST00000588542 MS4A13Q5J8X5 152 aa20.94■□□□□ 0.94
DDX39A-207ENST00000588542 BRMS1LQ5PSV4 323 aa20.94■□□□□ 0.94
DDX39A-207ENST00000588542 RAP1GAP2Q684P5 730 aa20.94■□□□□ 0.94
DDX39A-207ENST00000588542 GRAMD4Q6IC98 578 aa20.94■□□□□ 0.94
DDX39A-207ENST00000588542 MAMSTRQ6ZN01 415 aa20.94■□□□□ 0.94
DDX39A-207ENST00000588542 VPS36Q86VN1 386 aa20.94■□□□□ 0.94
DDX39A-207ENST00000588542 MAML2Q8IZL2 1156 aaPredicted RBP20.94■□□□□ 0.94
DDX39A-207ENST00000588542 TERB1Q8NA31 727 aa20.94■□□□□ 0.94
DDX39A-207ENST00000588542 CENPIQ92674 756 aaPredicted RBP20.94■□□□□ 0.94
DDX39A-207ENST00000588542 MCEEQ96PE7 176 aa20.94■□□□□ 0.94
DDX39A-207ENST00000588542 DDX50Q9BQ39 737 aaKnown RBP20.94■□□□□ 0.94
DDX39A-207ENST00000588542 KCNH6Q9H252 994 aa20.94■□□□□ 0.94
DDX39A-207ENST00000588542 SPATA6Q9NWH7 488 aaPredicted RBP20.94■□□□□ 0.94
DDX39A-207ENST00000588542 C2orf42Q9NWW7 574 aa20.94■□□□□ 0.94
DDX39A-207ENST00000588542 SLC12A6Q9UHW9 1150 aa20.94■□□□□ 0.94
DDX39A-207ENST00000588542 AKR1B15C9JRZ8 316 aaPredicted RBP20.93■□□□□ 0.94
DDX39A-207ENST00000588542 TACR2P21452 398 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 GPD1P21695 349 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 SDC4P31431 198 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 RDXP35241 583 aaKnown RBP20.93■□□□□ 0.94
DDX39A-207ENST00000588542 TNFRSF4P43489 277 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 DGKGP49619 791 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 TCF15Q12870 199 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 MAPK8IP2Q13387 824 aaPredicted RBP20.93■□□□□ 0.94
DDX39A-207ENST00000588542 MAMLD1Q13495 774 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 ASTE1Q2TB18 679 aaPredicted RBP20.93■□□□□ 0.94
DDX39A-207ENST00000588542 MPP7Q5T2T1 576 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 CNGA4Q8IV77 575 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 SPEM1Q8N4L4 309 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 TC2NQ8N9U0 490 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 CHP1Q99653 195 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 TKTL2Q9H0I9 626 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 WDCPQ9H6R7 721 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 TMEM51Q9NW97 253 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 SLC27A6Q9Y2P4 619 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 HCN4Q9Y3Q4 1203 aa20.93■□□□□ 0.94
DDX39A-207ENST00000588542 FANCMQ8IYD8 2048 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 CHURC1-FNTBB4DL54 471 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 TBL1XO60907 577 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 PAGE1O75459 146 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 RPS24P62847 133 aaKnown RBP20.92■□□□□ 0.94
DDX39A-207ENST00000588542 OGDHQ02218 1023 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 CDO1Q16878 200 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 PREPLQ4J6C6 727 aaPredicted RBP20.92■□□□□ 0.94
DDX39A-207ENST00000588542 ALKBH5Q6P6C2 394 aaKnown RBP20.92■□□□□ 0.94
DDX39A-207ENST00000588542 SND1Q7KZF4 910 aaKnown RBP eCLIP20.92■□□□□ 0.94
DDX39A-207ENST00000588542 STRADAQ7RTN6 431 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 CHSY1Q86X52 802 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 LGI2Q8N0V4 545 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 USP33Q8TEY7 942 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 ZNF653Q96CK0 615 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 PRRX2Q99811 253 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 SLC2A11Q9BYW1 496 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 TMPRSS4Q9NRS4 437 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 PARVAQ9NVD7 372 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 ZNHIT6Q9NWK9 470 aaKnown RBP20.92■□□□□ 0.94
DDX39A-207ENST00000588542 CNOT8Q9UFF9 292 aaKnown RBP20.92■□□□□ 0.94
DDX39A-207ENST00000588542 HCN2Q9UL51 889 aa20.92■□□□□ 0.94
DDX39A-207ENST00000588542 HS3ST4Q9Y661 456 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms