RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 NEUROG2Q9H2A3 272 aa7.3□□□□□ -1.24
TPM4-210ENST00000588507 CXXC4Q9H2H0 198 aa7.3□□□□□ -1.24
TPM4-210ENST00000588507 PABPC3Q9H361 631 aaKnown RBP7.3□□□□□ -1.24
TPM4-210ENST00000588507 GPN2Q9H9Y4 310 aaPredicted RBP7.3□□□□□ -1.24
TPM4-210ENST00000588507 ANKEF1Q9NU02 776 aa7.3□□□□□ -1.24
TPM4-210ENST00000588507 ZBTB40Q9NUA8 1239 aa7.3□□□□□ -1.24
TPM4-210ENST00000588507 RGL1Q9NZL6 768 aa7.3□□□□□ -1.24
TPM4-210ENST00000588507 EHD2Q9NZN4 543 aa7.3□□□□□ -1.24
TPM4-210ENST00000588507 UBQLN1Q9UMX0 589 aaKnown RBP7.3□□□□□ -1.24
TPM4-210ENST00000588507 V9GY48 417 aaPredicted RBP7.3□□□□□ -1.24
TPM4-210ENST00000588507 MXRA5Q9NR99 2828 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 CCDC69A6NI79 296 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 D6RAR5 112 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 HAX1O00165 279 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 PPEF2O14830 753 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 KCNAB3O43448 404 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 LATO43561 262 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 XPOTO43592 962 aaKnown RBP7.29□□□□□ -1.24
TPM4-210ENST00000588507 KRT86O43790 486 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 MCF2P10911 925 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 MX1P20591 662 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 HTR1EP28566 365 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 MFAP3P55082 362 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 YBX1P67809 324 aaKnown RBP7.29□□□□□ -1.24
TPM4-210ENST00000588507 SPAG1Q07617 926 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 EIF4HQ15056 248 aaKnown RBP7.29□□□□□ -1.24
TPM4-210ENST00000588507 ZBTB6Q15916 424 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 ATP1A1-AS1Q5TC04 95 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 TPH2Q8IWU9 490 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 TMTC2Q8N394 836 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 FANCBQ8NB91 859 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 ETNPPLQ8TBG4 499 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 PTPRN2Q92932 1015 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 RANBP9Q96S59 729 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 FOXC2Q99958 501 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 CIPCQ9C0C6 399 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 ZMYND12Q9H0C1 365 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 MCCC2Q9HCC0 563 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 PRSS16Q9NQE7 514 aa7.29□□□□□ -1.24
TPM4-210ENST00000588507 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.29□□□□□ -1.247e-12■■■■■ 49
TPM4-210ENST00000588507 CNTNAP5Q8WYK1 1306 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 CYB561D2O14569 222 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 KCNN4O15554 427 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 TIMM44O43615 452 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 RAD1O60671 282 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 USO1O60763 962 aaKnown RBP7.28□□□□□ -1.24
TPM4-210ENST00000588507 ATP2C2O75185 946 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 LRCH4O75427 683 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 F9P00740 461 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 ITGB3P05106 788 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 IRF1P10914 325 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 NUDT1P36639 197 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 NAMPTP43490 491 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 NOP2P46087 812 aaKnown RBP7.28□□□□□ -1.24
TPM4-210ENST00000588507 GUCY2FP51841 1108 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 EFNA5P52803 228 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 HNRNPKP61978 463 aaKnown RBP eCLIP7.28□□□□□ -1.24
TPM4-210ENST00000588507 USP46P62068 366 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 TLE4Q04727 773 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 PDIA5Q14554 519 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 ECM1Q16610 540 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 ZNF630Q2M218 657 aaPredicted RBP7.28□□□□□ -1.24
TPM4-210ENST00000588507 SEZ6Q53EL9 994 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 WSCD1Q658N2 575 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 JMJD6Q6NYC1 403 aaPredicted RBP7.28□□□□□ -1.24
TPM4-210ENST00000588507 CLEC9AQ6UXN8 241 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 PIK3AP1Q6ZUJ8 805 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 DENND5BQ6ZUT9 1274 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 RD3Q7Z3Z2 195 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 ANKS1BQ7Z6G8 1248 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 RAB11FIP4Q86YS3 637 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 Q8NA96 180 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 RBBP8NLQ8NC74 664 aaPredicted RBP7.28□□□□□ -1.24
TPM4-210ENST00000588507 NCOA7Q8NI08 942 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 PANK1Q8TE04 598 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 CHTF18Q8WVB6 975 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 SORCS1Q8WY21 1168 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 BHMTQ93088 406 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 WBP2Q969T9 261 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 IFT43Q96FT9 208 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 PPP1R13BQ96KQ4 1090 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 SPATA17Q96L03 361 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 ACO2Q99798 780 aaKnown RBP7.28□□□□□ -1.24
TPM4-210ENST00000588507 SMR3AQ99954 134 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 CAAP1Q9H8G2 361 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 PLK2Q9NYY3 685 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 LUZP4Q9P127 313 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 SERGEFQ9UGK8 458 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 VAV3Q9UKW4 847 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 PNMA8BQ9ULN7 279 aaPredicted RBP7.28□□□□□ -1.24
TPM4-210ENST00000588507 DMTF1Q9Y222 760 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 ZNF281Q9Y2X9 895 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 CSNK1G3Q9Y6M4 447 aa7.28□□□□□ -1.24
TPM4-210ENST00000588507 TNRC6AQ8NDV7 1962 aaKnown RBP7.28□□□□□ -1.24
TPM4-210ENST00000588507 CYP3A7-CYP3A51PA0A087WV96 503 aa7.27□□□□□ -1.25
TPM4-210ENST00000588507 TBC1D3DA0A087WVF3 549 aa7.27□□□□□ -1.25
TPM4-210ENST00000588507 TBC1D3IA0A087WXS9 549 aa7.27□□□□□ -1.25
TPM4-210ENST00000588507 TBC1D3EA0A087X179 549 aa7.27□□□□□ -1.25
TPM4-210ENST00000588507 TBC1D3KA0A087X1G2 549 aa7.27□□□□□ -1.25
TPM4-210ENST00000588507 A0A1W2PP55 124 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms