RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 C5orf60A6NFR6 353 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 PPP1R12AO14974 1030 aaPredicted RBP17.07■□□□□ 0.32
NFIX-210ENST00000588228 CHADO15335 359 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 MSI1O43347 362 aaKnown RBP17.07■□□□□ 0.32
NFIX-210ENST00000588228 LRIG2O94898 1065 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 HSPA1AP0DMV8 641 aaKnown RBP17.07■□□□□ 0.32
NFIX-210ENST00000588228 HSPA1BP0DMV9 641 aaKnown RBP17.07■□□□□ 0.32
NFIX-210ENST00000588228 OR1D2P34982 312 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 MAGEA4P43358 317 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 TUFMP49411 452 aaKnown RBP17.07■□□□□ 0.32
NFIX-210ENST00000588228 GLUD2P49448 558 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 ARL4CP56559 192 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 TAF10Q12962 218 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 PRKD1Q15139 912 aaPredicted RBP17.07■□□□□ 0.32
NFIX-210ENST00000588228 KRT71Q3SY84 523 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 UBAP2Q5T6F2 1119 aaKnown RBP17.07■□□□□ 0.32
NFIX-210ENST00000588228 ANKRD22Q5VYY1 191 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 COLGALT1Q8NBJ5 622 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 FERMT1Q9BQL6 677 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 OLA1Q9NTK5 396 aaKnown RBP17.07■□□□□ 0.32
NFIX-210ENST00000588228 SPG21Q9NZD8 308 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 HSFX1Q9UBD0 423 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 AFF4Q9UHB7 1163 aaKnown RBP17.07■□□□□ 0.32
NFIX-210ENST00000588228 ADAM21Q9UKJ8 722 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 TLR6Q9Y2C9 796 aa17.07■□□□□ 0.32
NFIX-210ENST00000588228 EIF3HO15372 352 aaKnown RBP eCLIP17.06■□□□□ 0.32
NFIX-210ENST00000588228 ACSL3O95573 720 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 SLC2A3P11169 496 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 RPL17P18621 184 aaKnown RBP17.06■□□□□ 0.32
NFIX-210ENST00000588228 SERPINB6P35237 376 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 GYS2P54840 703 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 KCNJ11Q14654 390 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 HIF1AQ16665 826 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 KYNUQ16719 465 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 AGBL2Q5U5Z8 902 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 FAM76AQ8TAV0 307 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 HTR3CQ8WXA8 447 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 SLC39A13Q96H72 371 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 TTC25Q96NG3 672 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 CLSTN3Q9BQT9 956 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 TTLL2Q9BWV7 592 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 KLC2Q9H0B6 622 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 SAYSD1Q9NPB0 183 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 RAB6BQ9NRW1 208 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.06■□□□□ 0.32
NFIX-210ENST00000588228 NUDT5Q9UKK9 219 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 SNX10Q9Y5X0 201 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 PLXNA3P51805 1871 aa17.06■□□□□ 0.32
NFIX-210ENST00000588228 SLC38A8A6NNN8 435 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 KCNU1A8MYU2 1149 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 C2CD2LO14523 706 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 ALOX15BO15296 676 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 NCAM2O15394 837 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 TMEM63AO94886 807 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 ZDHHC11BP0C7U3 371 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 VAV1P15498 845 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 ATF6P18850 670 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 EPHB2P29323 1055 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 MAGEA6P43360 314 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 TPGS2Q68CL5 300 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 DDX53Q86TM3 631 aaKnown RBP17.05■□□□□ 0.32
NFIX-210ENST00000588228 CCDC33Q8N5R6 958 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 CCDC110Q8TBZ0 833 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 LRRN4Q8WUT4 740 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 C9orf72Q96LT7 481 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 YME1L1Q96TA2 773 aa17.05■□□□□ 0.32
NFIX-210ENST00000588228 ROPN1BQ9BZX4 212 aaPredicted RBP17.05■□□□□ 0.32
NFIX-210ENST00000588228 ROPN1Q9HAT0 212 aaPredicted RBP17.05■□□□□ 0.32
NFIX-210ENST00000588228 XPO7Q9UIA9 1087 aaKnown RBP17.05■□□□□ 0.32
NFIX-210ENST00000588228 TCRBV7S3A2A0A539 114 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 PAGE1O75459 146 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 STK10O94804 968 aaKnown RBP17.04■□□□□ 0.32
NFIX-210ENST00000588228 ABLIM3O94929 683 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 URODP06132 367 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 ABHD2P08910 425 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 HOXC13P31276 330 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 PPM1AP35813 382 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 NRG1Q02297 640 aaPredicted RBP17.04■□□□□ 0.32
NFIX-210ENST00000588228 MANEALQ5VSG8 457 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 KCTD16Q68DU8 428 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 PPP1R21Q6ZMI0 780 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 OTOP2Q7RTS6 562 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 UBE2Q1Q7Z7E8 422 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 TAB3Q8N5C8 712 aaPredicted RBP17.04■□□□□ 0.32
NFIX-210ENST00000588228 ZNF461Q8TAF7 563 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 GIPC2Q8TF65 315 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 LGMNQ99538 433 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 FRMD8Q9BZ67 464 aaPredicted RBP17.04■□□□□ 0.32
NFIX-210ENST00000588228 BRD8Q9H0E9 1235 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 CENPHQ9H3R5 247 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 PRDM12Q9H4Q4 367 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 A0A0A0MRY4 1105 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 E7ESA3 106 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 GOLGA8MH3BSY2 632 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 MX2P20592 715 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 TBX4P57082 545 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 AP1B1Q10567 949 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 PDIA2Q13087 525 aaKnown RBP17.04■□□□□ 0.32
NFIX-210ENST00000588228 CBLBQ13191 982 aa17.04■□□□□ 0.32
NFIX-210ENST00000588228 PPIGQ13427 754 aaKnown RBP eCLIP17.04■□□□□ 0.321e-7■■□□□ 12.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms