RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 GGA2Q9UJY4 613 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 NAALADL1Q9UQQ1 740 aa14.93□□□□□ -0.02
VMP1-206ENST00000587945 CHD8Q9HCK8 2581 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 ARHGAP33O14559 1287 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 ACSL4O60488 711 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 TBL1XO60907 577 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 FBXO21O94952 628 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 PABPC1P11940 636 aaKnown RBP14.92□□□□□ -0.02
VMP1-206ENST00000587945 CD70P32970 193 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 GPD2P43304 727 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 SLC11A2P49281 568 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 MARSP56192 900 aaKnown RBP14.92□□□□□ -0.02
VMP1-206ENST00000587945 SEMA3BQ13214 749 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 CAMK4Q16566 473 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 PLEKHG6Q3KR16 790 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 FNDC3BQ53EP0 1204 aaKnown RBP14.92□□□□□ -0.02
VMP1-206ENST00000587945 SYCP2LQ5T4T6 812 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 PIK3R6Q5UE93 754 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 NADSYN1Q6IA69 706 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 GJB7Q6PEY0 223 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 RABEPKQ7Z6M1 372 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 FAM124AQ86V42 546 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 CREBRFQ8IUR6 639 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 HDDC3Q8N4P3 179 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 ADAM32Q8TC27 787 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 DQX1Q8TE96 717 aaKnown RBP14.92□□□□□ -0.02
VMP1-206ENST00000587945 GOLGA1Q92805 767 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 FOXJ1Q92949 421 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 CRACR2AQ9BSW2 395 aa14.92□□□□□ -0.02
VMP1-206ENST00000587945 SPAARA0A1B0GVQ0 90 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 MEI4A8MW99 385 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 OPHN1O60890 802 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 LETM1O95202 739 aaPredicted RBP14.91□□□□□ -0.02
VMP1-206ENST00000587945 ACADMP11310 421 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 ZNF445P59923 1031 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 APBA1Q02410 837 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 PTPRNQ16849 979 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 WDR45BQ5MNZ6 344 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 NUGGCQ68CJ6 796 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 MBLAC2Q68D91 279 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 KIAA0907Q7Z7F0 614 aaPredicted RBP14.91□□□□□ -0.02
VMP1-206ENST00000587945 PIP4P1Q86T03 277 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 UNC45BQ8IWX7 931 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.91□□□□□ -0.02
VMP1-206ENST00000587945 OR2T3Q8NH03 318 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 WFIKKN2Q8TEU8 576 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 FAM149B1Q96BN6 582 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 FCRL2Q96LA5 508 aaPredicted RBP14.91□□□□□ -0.02
VMP1-206ENST00000587945 PRICKLE1Q96MT3 831 aaPredicted RBP14.91□□□□□ -0.02
VMP1-206ENST00000587945 MED15Q96RN5 788 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 MIR1-1HGQ9H1L0 117 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 TMEM245Q9H330 911 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 SLC32A1Q9H598 525 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 CYTH4Q9UIA0 394 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 PLA2G4CQ9UP65 541 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 WASF3Q9UPY6 502 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 CNTN6Q9UQ52 1028 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 NUP205Q92621 2012 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 CACNA1BQ00975 2339 aa14.91□□□□□ -0.02
VMP1-206ENST00000587945 MOCS2O96007 188 aaPredicted RBP14.9□□□□□ -0.02
VMP1-206ENST00000587945 SYPP08247 313 aa14.9□□□□□ -0.02
VMP1-206ENST00000587945 GNSP15586 552 aa14.9□□□□□ -0.02
VMP1-206ENST00000587945 OXTRP30559 389 aa14.9□□□□□ -0.02
VMP1-206ENST00000587945 RPL34P49207 117 aaKnown RBP14.9□□□□□ -0.02
VMP1-206ENST00000587945 RPS24P62847 133 aaKnown RBP14.9□□□□□ -0.02
VMP1-206ENST00000587945 RING1Q06587 406 aa14.9□□□□□ -0.02
VMP1-206ENST00000587945 CAMK2GQ13555 558 aaPredicted RBP14.9□□□□□ -0.02
VMP1-206ENST00000587945 E2F5Q15329 346 aa14.9□□□□□ -0.02
VMP1-206ENST00000587945 DCAF12L1Q5VU92 463 aa14.9□□□□□ -0.02
VMP1-206ENST00000587945 SYPL2Q5VXT5 272 aa14.9□□□□□ -0.02
VMP1-206ENST00000587945 TAC4Q86UU9 113 aa14.9□□□□□ -0.02
VMP1-206ENST00000587945 AHI1Q8N157 1196 aa14.9□□□□□ -0.02
VMP1-206ENST00000587945 ZCCHC9Q8N567 271 aaKnown RBP14.9□□□□□ -0.02
VMP1-206ENST00000587945 DNASE2BQ8WZ79 361 aa14.9□□□□□ -0.02
VMP1-206ENST00000587945 LMLNQ96KR4 655 aa14.9□□□□□ -0.02
VMP1-206ENST00000587945 NUP58Q9BVL2 599 aa14.9□□□□□ -0.02
VMP1-206ENST00000587945 NUCKS1Q9H1E3 243 aaKnown RBP14.9□□□□□ -0.02
VMP1-206ENST00000587945 MTG2Q9H4K7 406 aa14.9□□□□□ -0.02
VMP1-206ENST00000587945 KIAA1468Q9P260 1216 aa14.9□□□□□ -0.02
VMP1-206ENST00000587945 XPO7Q9UIA9 1087 aaKnown RBP14.9□□□□□ -0.02
VMP1-206ENST00000587945 E5RJQ4 531 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 PAPSS1O43252 624 aaPredicted RBP14.89□□□□□ -0.03
VMP1-206ENST00000587945 THAP12O43422 761 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 FGFR1OPO95684 399 aaKnown RBP14.89□□□□□ -0.03
VMP1-206ENST00000587945 IGLV3-19P01714 112 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 DLDP09622 509 aaKnown RBP14.89□□□□□ -0.03
VMP1-206ENST00000587945 CD59P13987 128 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 POLR2EP19388 210 aaKnown RBP14.89□□□□□ -0.03
VMP1-206ENST00000587945 SLC9A1P19634 815 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 ACADSBP45954 432 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 FAM193AP78312 1265 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 SIM1P81133 766 aaPredicted RBP14.89□□□□□ -0.03
VMP1-206ENST00000587945 GRIK2Q13002 908 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 ARHGAP44Q17R89 818 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 MPP7Q5T2T1 576 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 MMS22LQ6ZRQ5 1243 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 MFN1Q8IWA4 741 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 CFAP52Q8N1V2 620 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 CADM4Q8NFZ8 388 aa14.89□□□□□ -0.03
VMP1-206ENST00000587945 ZNF606Q8WXB4 792 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms