RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 ZNF276Q8N554 614 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 CADM4Q8NFZ8 388 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 RNF139Q8WU17 664 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 DNASE2BQ8WZ79 361 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 ERCC4Q92889 916 aaPredicted RBP6.7□□□□□ -1.34
SDF2-205ENST00000587629 PLD4Q96BZ4 506 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 TMA16Q96EY4 203 aaKnown RBP6.7□□□□□ -1.34
SDF2-205ENST00000587629 NUP58Q9BVL2 599 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 UBXN6Q9BZV1 441 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 MTG2Q9H4K7 406 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 C6orf106Q9H6K1 298 aaPredicted RBP6.7□□□□□ -1.34
SDF2-205ENST00000587629 ABCB8Q9NUT2 735 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 HESX1Q9UBX0 185 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 TSPAN16Q9UKR8 245 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 PLA2G4CQ9UP65 541 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 FNDC3AQ9Y2H6 1198 aaKnown RBP6.7□□□□□ -1.34
SDF2-205ENST00000587629 CACNA1GO43497 2377 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 PLXND1Q9Y4D7 1925 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 PI4KAP42356 2102 aa6.7□□□□□ -1.34
SDF2-205ENST00000587629 DMXL2Q8TDJ6 3036 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 XPO1O14980 1071 aaKnown RBP6.69□□□□□ -1.34
SDF2-205ENST00000587629 NPC1O15118 1278 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 TIMM44O43615 452 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 STX10O60499 249 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 TBL1XO60907 577 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 FSBPO95073 299 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 ATXN1LP0C7T5 689 aaKnown RBP6.69□□□□□ -1.34
SDF2-205ENST00000587629 HLA-FP30511 346 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 ACSL1P33121 698 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 MATKP42679 507 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 PRCPP42785 496 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 ZNF132P52740 706 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 PMS1P54277 932 aaKnown RBP6.69□□□□□ -1.34
SDF2-205ENST00000587629 BST2Q10589 180 aaKnown RBP6.69□□□□□ -1.34
SDF2-205ENST00000587629 SCAPQ12770 1279 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 CUL2Q13617 745 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 HNRNPDQ14103 355 aaKnown RBP6.69□□□□□ -1.34
SDF2-205ENST00000587629 EIF4HQ15056 248 aaKnown RBP6.69□□□□□ -1.34
SDF2-205ENST00000587629 TRIP4Q15650 581 aaPredicted RBP6.69□□□□□ -1.34
SDF2-205ENST00000587629 KIF19Q2TAC6 998 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 EDRF1Q3B7T1 1238 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 MPPE1Q53F39 396 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 ANKRD40Q6AI12 368 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 PM20D1Q6GTS8 502 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 ISM2Q6H9L7 571 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 LRSAM1Q6UWE0 723 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 CHST9Q7L1S5 443 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 BHLHA9Q7RTU4 235 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 METTL3Q86U44 580 aaKnown RBP6.69□□□□□ -1.34
SDF2-205ENST00000587629 ZC3H3Q8IXZ2 948 aaKnown RBP6.69□□□□□ -1.34
SDF2-205ENST00000587629 CPXM2Q8N436 756 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 TTC39CQ8N584 583 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 RBBP8NLQ8NC74 664 aaPredicted RBP6.69□□□□□ -1.34
SDF2-205ENST00000587629 OR2T3Q8NH03 318 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 MDM1Q8TC05 714 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 RHBDD1Q8TEB9 315 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 GANCQ8TET4 914 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 TFAP2BQ92481 460 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 SLC2A11Q9BYW1 496 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 ZDHHC5Q9C0B5 715 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 LHX5Q9H2C1 402 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 PRSS16Q9NQE7 514 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 TM7SF3Q9NS93 570 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 STIM2Q9P246 746 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 GGA2Q9UJY4 613 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 PCOLCE2Q9UKZ9 415 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.69□□□□□ -1.34
SDF2-205ENST00000587629 APOBEC2Q9Y235 224 aaKnown RBP6.69□□□□□ -1.34
SDF2-205ENST00000587629 SNX11Q9Y5W9 270 aa6.69□□□□□ -1.34
SDF2-205ENST00000587629 PCNX2A6NKB5 2137 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 FAM237AA0A1B0GTK4 181 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 A0A1W2PQ27 194 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 A0A1W2PQ64 194 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 FAM221BA6H8Z2 402 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 TRIM49BA6NDI0 452 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 FAM47DPA6NHR8 397 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 RNF225M0QZC1 329 aaPredicted RBP6.68□□□□□ -1.34
SDF2-205ENST00000587629 O00370 1275 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 CBFA2T3O75081 653 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 CER1O95813 267 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 IGLV3-19P01714 112 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 PABPC1P11940 636 aaKnown RBP6.68□□□□□ -1.34
SDF2-205ENST00000587629 POLR2EP19388 210 aaKnown RBP6.68□□□□□ -1.34
SDF2-205ENST00000587629 SLC6A4P31645 630 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 CD70P32970 193 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 NUMBP49757 651 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 AFF3P51826 1226 aaKnown RBP6.68□□□□□ -1.34
SDF2-205ENST00000587629 BCAT1P54687 386 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 RPS14P62263 151 aaKnown RBP6.68□□□□□ -1.34
SDF2-205ENST00000587629 IL9RQ01113 521 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 ENPEPQ07075 957 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 CAMK2GQ13555 558 aaPredicted RBP6.68□□□□□ -1.34
SDF2-205ENST00000587629 PTPRNQ16849 979 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 KCNT1Q5JUK3 1230 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 PRAMEF14Q5SWL7 426 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 ADGRF1Q5T601 910 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 MBLAC2Q68D91 279 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 PMF1Q6P1K2 205 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 TMEM270Q6UE05 265 aa6.68□□□□□ -1.34
SDF2-205ENST00000587629 IL27RAQ6UWB1 636 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms