RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 MID2Q9UJV3 735 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 MAFFQ9ULX9 164 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 ITSN1Q15811 1721 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 KTN1Q86UP2 1357 aaKnown RBP4.99□□□□□ -1.61
VMP1-205ENST00000587470 ANKRD36BQ8N2N9 1353 aa4.99□□□□□ -1.61
VMP1-205ENST00000587470 PCNTO95613 3336 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 EDC4Q6P2E9 1401 aaKnown RBP4.98□□□□□ -1.61
VMP1-205ENST00000587470 AGPSO00116 658 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 GOLIM4O00461 696 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 TMEM191BP0C7N4 346 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 ATF7P17544 494 aaPredicted RBP4.98□□□□□ -1.61
VMP1-205ENST00000587470 BTF3P20290 206 aaKnown RBP4.98□□□□□ -1.61
VMP1-205ENST00000587470 CFHR3Q02985 330 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 STK3Q13188 491 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 KIAA0753Q2KHM9 967 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 SHC4Q6S5L8 630 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 CHST15Q7LFX5 561 aaPredicted RBP4.98□□□□□ -1.61
VMP1-205ENST00000587470 SESTD1Q86VW0 696 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.98□□□□□ -1.61
VMP1-205ENST00000587470 C12orf76Q8N812 135 aaPredicted RBP4.98□□□□□ -1.61
VMP1-205ENST00000587470 FAM156AQ8NDB6 213 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 MAP4K1Q92918 833 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 ZCWPW1Q9H0M4 648 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 PANK3Q9H999 370 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 STEAP1Q9UHE8 339 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 ITGB1BP2Q9UKP3 347 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 CCDC7Q96M83 1385 aa4.98□□□□□ -1.61
VMP1-205ENST00000587470 AKAP12Q02952 1782 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 CPDO75976 1380 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 GOLGA6CA6NDK9 693 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 GOLGA6BA6NDN3 693 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 IKBKBO14920 756 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 MGEA5O60502 916 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 SNX2O60749 519 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 ZBED1O96006 694 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 GOLGA6DP0CG33 693 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 IL1R1P14778 569 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 RPL17P18621 184 aaKnown RBP4.97□□□□□ -1.61
VMP1-205ENST00000587470 FAM193AP78312 1265 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 KCNB1Q14721 858 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 TWIST1Q15672 202 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 ST3GAL2Q16842 350 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 AWAT1Q58HT5 328 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 C10orf25Q5T742 122 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 PLAG1Q6DJT9 500 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 ANO7Q6IWH7 933 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 MZT2AQ6P582 158 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 UNC13DQ70J99 1090 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 TECPR1Q7Z6L1 1165 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 SDR16C5Q8N3Y7 309 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 METTL25Q8N6Q8 603 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 ABHD8Q96I13 439 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 VPS50Q96JG6 964 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 MSLNLQ96KJ4 702 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 HIST1H2AAQ96QV6 131 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 SIGLEC11Q96RL6 698 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 GOLGA6AQ9NYA3 693 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 DDX20Q9UHI6 824 aaKnown RBP4.97□□□□□ -1.61
VMP1-205ENST00000587470 RIMKLBQ9ULI2 386 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 CAPN11Q9UMQ6 739 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 SBF2Q86WG5 1849 aa4.97□□□□□ -1.61
VMP1-205ENST00000587470 KIAA0232Q92628 1395 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 CLIC1O00299 241 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 TPP1O14773 563 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 TSPAN6O43657 245 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 NTN1O95631 604 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 MCM5P33992 734 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 POLGP54098 1239 aaPredicted RBP4.96□□□□□ -1.62
VMP1-205ENST00000587470 RBMS2Q15434 407 aaKnown RBP4.96□□□□□ -1.62
VMP1-205ENST00000587470 TMTC4Q5T4D3 741 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 PPP4R4Q6NUP7 873 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 DEF8Q6ZN54 512 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 USP49Q70CQ1 688 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 MYO1HQ8N1T3 1032 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 C11orf44Q8N8P7 122 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 PNPLA1Q8N8W4 532 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 JDP2Q8WYK2 163 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 EDC3Q96F86 508 aaKnown RBP4.96□□□□□ -1.62
VMP1-205ENST00000587470 ZDHHC12Q96GR4 267 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 POLR3GLQ9BT43 218 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 MTMR4Q9NYA4 1195 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 KLHL42Q9P2K6 505 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 DNAJB11Q9UBS4 358 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 ASAP1Q9ULH1 1129 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 MON2Q7Z3U7 1717 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 CRYBG1Q9Y4K1 1723 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 BCL9O00512 1426 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 PIK3C2AO00443 1686 aa4.96□□□□□ -1.62
VMP1-205ENST00000587470 PARP4Q9UKK3 1724 aaKnown RBP4.95□□□□□ -1.62
VMP1-205ENST00000587470 MYMKA6NI61 221 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 ADAM10O14672 748 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 ADRA1DP25100 572 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 PEX2P28328 305 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 HOXD9P28356 352 aaPredicted RBP4.95□□□□□ -1.62
VMP1-205ENST00000587470 CARSP49589 748 aaKnown RBP4.95□□□□□ -1.62
VMP1-205ENST00000587470 CTCFP49711 727 aaPredicted RBP4.95□□□□□ -1.62
VMP1-205ENST00000587470 FOXG1P55316 489 aaPredicted RBP4.95□□□□□ -1.62
VMP1-205ENST00000587470 ZNF91Q05481 1191 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 DEUP1Q05D60 604 aa4.95□□□□□ -1.62
VMP1-205ENST00000587470 GBX1Q14549 363 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms