RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 ANKRD36BP1Q96IX9 119 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 DNAJC1Q96KC8 554 aaKnown RBP16.93■□□□□ 0.3
RANBP3-209ENST00000587411 NIFKQ9BYG3 293 aaKnown RBP16.93■□□□□ 0.3
RANBP3-209ENST00000587411 GRIP2Q9C0E4 1043 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 PCDHB12Q9Y5F1 795 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 METTL18O95568 372 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 FAM58BPP0C7Q3 252 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 THRAP10827 490 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 NR1H2P55055 460 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 PTPN11Q06124 597 aaPredicted RBP16.93■□□□□ 0.3
RANBP3-209ENST00000587411 MYLK3Q32MK0 819 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 SH3PXD2AQ5TCZ1 1133 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 VWA5B1Q5TIE3 1220 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 OLFML2BQ68BL8 750 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 EPGNQ6UW88 154 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 FAM83AQ86UY5 434 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 TICAM1Q8IUC6 712 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 EFCAB3Q8N7B9 438 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 TBCBQ99426 244 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 PCDH18Q9HCL0 1135 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 VPS28Q9UK41 221 aa16.93■□□□□ 0.3
RANBP3-209ENST00000587411 ZNF487B1APH4 448 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 SPATA31C2B4DYI2 1134 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 HOXC6P09630 235 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 MLNP12872 115 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 NUMBP49757 651 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 DCTN2Q13561 401 aaKnown RBP16.92■□□□□ 0.3
RANBP3-209ENST00000587411 SEMA5AQ13591 1074 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 ZNF667Q5HYK9 610 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 PCDH19Q8TAB3 1148 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 ZNF670Q9BS34 389 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 CDH19Q9H159 772 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 USP21Q9UK80 565 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.92■□□□□ 0.3
RANBP3-209ENST00000587411 YDJCA8MPS7 323 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 M0QYV0 167 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 ZSCAN9O15535 394 aaPredicted RBP16.92■□□□□ 0.3
RANBP3-209ENST00000587411 ZBTB14O43829 449 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 CDK4P11802 303 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 RAP1GAPP47736 663 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 MYBPC1Q00872 1141 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 SULT2A1Q06520 285 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 PEX6Q13608 980 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 CCDC153Q494R4 210 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 STYK1Q6J9G0 422 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 SENP6Q9GZR1 1112 aaPredicted RBP16.92■□□□□ 0.3
RANBP3-209ENST00000587411 RIMS3Q9UJD0 308 aa16.92■□□□□ 0.3
RANBP3-209ENST00000587411 A0A0J9YVX5 310 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 MSCO60682 206 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 ZMPSTE24O75844 475 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 PRKCGP05129 697 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 ARRB2P32121 409 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 GPD2P43304 727 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 ATG14Q6ZNE5 492 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 DLG3Q92796 817 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 CNBD2Q96M20 576 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 VPS33BQ9H267 617 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 COG4Q9H9E3 785 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 GPR25O00155 361 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 B4GALT4O60513 344 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 CPA3P15088 417 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 ATP6V1B1P15313 513 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 HSPA1LP34931 641 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 SERPINB8P50452 374 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 FLOT2Q14254 428 aa16.91■□□□□ 0.3
RANBP3-209ENST00000587411 C15orf59Q2T9L4 293 aaPredicted RBP16.91■□□□□ 0.3
RANBP3-209ENST00000587411 RSBN1LQ6PCB5 846 aaPredicted RBP16.91■□□□□ 0.3
RANBP3-209ENST00000587411 ACO2Q99798 780 aaKnown RBP16.91■□□□□ 0.3
RANBP3-209ENST00000587411 DDX18Q9NVP1 670 aaKnown RBP16.91■□□□□ 0.3
RANBP3-209ENST00000587411 G3BP2Q9UN86 482 aaKnown RBP16.91■□□□□ 0.3
RANBP3-209ENST00000587411 TMEM114B3SHH9 223 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 DPYSL4O14531 572 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 CAPNS1P04632 268 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 SETSIPP0DME0 302 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 HMGB2P26583 209 aaKnown RBP16.9■□□□□ 0.3
RANBP3-209ENST00000587411 PRKG1Q13976 671 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 FAM182AQ5T1J6 154 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 TRNP1Q6NT89 227 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 BNC2Q6ZN30 1099 aaPredicted RBP16.9■□□□□ 0.3
RANBP3-209ENST00000587411 KYQ8NBH2 561 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 DIS3LQ8TF46 1054 aaKnown RBP16.9■□□□□ 0.3
RANBP3-209ENST00000587411 GAB3Q8WWW8 586 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 SREK1Q8WXA9 508 aaKnown RBP16.9■□□□□ 0.3
RANBP3-209ENST00000587411 TMEM176AQ96HP8 235 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 CNDP1Q96KN2 507 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 MRPL1Q9BYD6 325 aaKnown RBP16.9■□□□□ 0.3
RANBP3-209ENST00000587411 BTBD7Q9P203 1132 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 WDR27A2RRH5 827 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 VWA5AO00534 786 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 SLC22A2O15244 555 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 GLDCP23378 1020 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 ADORA2AP29274 412 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 GARSP41250 739 aaKnown RBP16.9■□□□□ 0.3
RANBP3-209ENST00000587411 NUDT2P50583 147 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 ADARP55265 1226 aaKnown RBP16.9■□□□□ 0.3
RANBP3-209ENST00000587411 CDO1Q16878 200 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 SETD3Q86TU7 594 aaPredicted RBP16.9■□□□□ 0.3
RANBP3-209ENST00000587411 ZNF410Q86VK4 478 aa16.9■□□□□ 0.3
RANBP3-209ENST00000587411 LENG8Q96PV6 779 aaPredicted RBP16.9■□□□□ 0.3
RANBP3-209ENST00000587411 PRPF18Q99633 342 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms