RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 KRT1P04264 644 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 SLC2A3P11169 496 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 CCR1P32246 355 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 GGCXP38435 758 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 CETN2P41208 172 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 CDKN2BP42772 138 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 KPNA1P52294 538 aaPredicted RBP15.46■□□□□ 0.07
NFIX-208ENST00000587260 ARL13BQ3SXY8 428 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 CCDC181Q5TID7 509 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 MFSD7Q6UXD7 560 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 SPOCD1Q6ZMY3 1216 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 SLC13A5Q86YT5 568 aaPredicted RBP15.46■□□□□ 0.07
NFIX-208ENST00000587260 ARID3BQ8IVW6 561 aaPredicted RBP15.46■□□□□ 0.07
NFIX-208ENST00000587260 MAP7D3Q8IWC1 876 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 KCTD6Q8NC69 237 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 MNS1Q8NEH6 495 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 RPGRIP1Q96KN7 1286 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 WDCPQ9H6R7 721 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.46■□□□□ 0.07
NFIX-208ENST00000587260 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.46■□□□□ 0.07
NFIX-208ENST00000587260 GPATCH2LQ9NWQ4 482 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 CFAP97Q9P2B7 532 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 XPO7Q9UIA9 1087 aaKnown RBP15.46■□□□□ 0.07
NFIX-208ENST00000587260 ARHGAP26Q9UNA1 814 aa15.46■□□□□ 0.07
NFIX-208ENST00000587260 LRRD1A4D1F6 860 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 SOBPA7XYQ1 873 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 I6L893 689 aaPredicted RBP15.45■□□□□ 0.06
NFIX-208ENST00000587260 LEFTY2O00292 366 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 IGLV3-27P01718 113 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 FGGP02679 453 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 CORO1AP31146 461 aaKnown RBP15.45■□□□□ 0.06
NFIX-208ENST00000587260 L1CAMP32004 1257 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 COG7P83436 770 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 TFF2Q03403 129 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 RING1Q06587 406 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 MTA1Q13330 715 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 TFDP3Q5H9I0 405 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 FAM78AQ5JUQ0 283 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 ZFYVE27Q5T4F4 411 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 AADACL2Q6P093 401 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 ANKS1BQ7Z6G8 1248 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 RIN3Q8TB24 985 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 ADAMTS19Q8TE59 1207 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 SH3RF2Q8TEC5 729 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 TSC1Q92574 1164 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 HSPH1Q92598 858 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 RNF25Q96BH1 459 aaPredicted RBP15.45■□□□□ 0.06
NFIX-208ENST00000587260 PLD4Q96BZ4 506 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 ASB16Q96NS5 453 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 OSBPL8Q9BZF1 889 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 TDP1Q9NUW8 608 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 GDE1Q9NZC3 331 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 RCOR3Q9P2K3 495 aaPredicted RBP15.45■□□□□ 0.06
NFIX-208ENST00000587260 ZMYM5Q9UJ78 669 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 AP4E1Q9UPM8 1137 aa15.45■□□□□ 0.06
NFIX-208ENST00000587260 RIOK3O14730 519 aaKnown RBP15.44■□□□□ 0.06
NFIX-208ENST00000587260 SLU7O95391 586 aaKnown RBP15.44■□□□□ 0.06
NFIX-208ENST00000587260 IL4RP24394 825 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 VIPR2P41587 438 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 ZNF135P52742 658 aaPredicted RBP15.44■□□□□ 0.06
NFIX-208ENST00000587260 CDH6P55285 790 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 KLF1Q13351 362 aaPredicted RBP15.44■□□□□ 0.06
NFIX-208ENST00000587260 DPYSL3Q14195 570 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 CA9Q16790 459 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 ODF2Q5BJF6 829 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 EFHC2Q5JST6 749 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 NUGGCQ68CJ6 796 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 DENND1CQ8IV53 801 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 MAIP1Q8WWC4 291 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 SMARCD2Q92925 531 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 FAF2Q96CS3 445 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 HAPLN3Q96S86 360 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 ZNF670Q9BS34 389 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 CARD6Q9BX69 1037 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 OSBPL2Q9H1P3 480 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 PCDH18Q9HCL0 1135 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 SH3BP1Q9Y3L3 701 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 SNX10Q9Y5X0 201 aa15.44■□□□□ 0.06
NFIX-208ENST00000587260 KIF26AQ9ULI4 1882 aaPredicted RBP15.44■□□□□ 0.06
NFIX-208ENST00000587260 hCG_1818297A0A087WSY0 165 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 CTAGE15A4D2H0 777 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 PI4K2BG5E9Z4 385 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 PAGE1O75459 146 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 CD48P09326 243 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 CTAGE8P0CG41 777 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 HCAR3P49019 387 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 HARS2P49590 506 aaKnown RBP15.43■□□□□ 0.06
NFIX-208ENST00000587260 SEMA3BQ13214 749 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 LONRF2Q1L5Z9 754 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 LEXMQ3ZCV2 418 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 ACBD5Q5T8D3 534 aaPredicted RBP15.43■□□□□ 0.06
NFIX-208ENST00000587260 PTCRAQ6ISU1 281 aaPredicted RBP15.43■□□□□ 0.06
NFIX-208ENST00000587260 CTAGE6Q86UF2 777 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 CCDC50Q8IVM0 306 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 CTAGE4Q8IX94 777 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 SPATA4Q8NEY3 305 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 RSPRY1Q96DX4 576 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 MAGEB5Q9BZ81 275 aa15.43■□□□□ 0.06
NFIX-208ENST00000587260 DHX35Q9H5Z1 703 aaKnown RBP15.43■□□□□ 0.06
NFIX-208ENST00000587260 PRDM16Q9HAZ2 1276 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms