RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 GPR17Q13304 367 aa19.18■□□□□ 0.66
RETREG3-205ENST00000586870 SMAD4Q13485 552 aaKnown RBP19.18■□□□□ 0.66
RETREG3-205ENST00000586870 SLC39A12Q504Y0 691 aa19.18■□□□□ 0.66
RETREG3-205ENST00000586870 DNAJC21Q5F1R6 531 aaKnown RBP19.18■□□□□ 0.66
RETREG3-205ENST00000586870 MDH1BQ5I0G3 518 aa19.18■□□□□ 0.66
RETREG3-205ENST00000586870 RNF19BQ6ZMZ0 732 aa19.18■□□□□ 0.66
RETREG3-205ENST00000586870 PRUNE1Q86TP1 453 aa19.18■□□□□ 0.66
RETREG3-205ENST00000586870 SMRP1Q8NCR6 262 aa19.18■□□□□ 0.66
RETREG3-205ENST00000586870 OR10T2Q8NGX3 314 aa19.18■□□□□ 0.66
RETREG3-205ENST00000586870 SLC7A14Q8TBB6 771 aa19.18■□□□□ 0.66
RETREG3-205ENST00000586870 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.18■□□□□ 0.66
RETREG3-205ENST00000586870 RSAD2Q8WXG1 361 aa19.18■□□□□ 0.66
RETREG3-205ENST00000586870 RIPOR3Q96MK2 946 aa19.18■□□□□ 0.66
RETREG3-205ENST00000586870 SNRNP25Q9BV90 132 aaKnown RBP19.18■□□□□ 0.66
RETREG3-205ENST00000586870 PCDH18Q9HCL0 1135 aa19.18■□□□□ 0.66
RETREG3-205ENST00000586870 ZDHHC7Q9NXF8 308 aa19.18■□□□□ 0.66
RETREG3-205ENST00000586870 MAFFQ9ULX9 164 aa19.18■□□□□ 0.66
RETREG3-205ENST00000586870 DAB1O75553 588 aa19.17■□□□□ 0.66
RETREG3-205ENST00000586870 ETS1P14921 441 aa19.17■□□□□ 0.66
RETREG3-205ENST00000586870 GNGT1P63211 74 aa19.17■□□□□ 0.66
RETREG3-205ENST00000586870 MMRN1Q13201 1228 aa19.17■□□□□ 0.66
RETREG3-205ENST00000586870 NOMO1Q15155 1222 aa19.17■□□□□ 0.66
RETREG3-205ENST00000586870 ERMARDQ5T6L9 678 aa19.17■□□□□ 0.66
RETREG3-205ENST00000586870 TMEM209Q96SK2 561 aa19.17■□□□□ 0.66
RETREG3-205ENST00000586870 ZNF670Q9BS34 389 aa19.17■□□□□ 0.66
RETREG3-205ENST00000586870 ZCWPW1Q9H0M4 648 aa19.17■□□□□ 0.66
RETREG3-205ENST00000586870 STMN4Q9H169 189 aaPredicted RBP19.17■□□□□ 0.66
RETREG3-205ENST00000586870 LRRC4Q9HBW1 653 aa19.17■□□□□ 0.66
RETREG3-205ENST00000586870 CRTAC1Q9NQ79 661 aa19.17■□□□□ 0.66
RETREG3-205ENST00000586870 SAE1Q9UBE0 346 aaPredicted RBP19.17■□□□□ 0.66
RETREG3-205ENST00000586870 SHOC2Q9UQ13 582 aa19.17■□□□□ 0.66
RETREG3-205ENST00000586870 UNC80Q8N2C7 3258 aa19.17■□□□□ 0.66
RETREG3-205ENST00000586870 CLDN5O00501 218 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 MBTPS2O43462 519 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 RFPL2O75678 378 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 LRG1P02750 347 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 RBP3P10745 1247 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 PECAM1P16284 738 aaPredicted RBP19.16■□□□□ 0.66
RETREG3-205ENST00000586870 TGM2P21980 687 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 IL4RP24394 825 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 STIP1P31948 543 aaKnown RBP19.16■□□□□ 0.66
RETREG3-205ENST00000586870 MATKP42679 507 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 ATP1A2P50993 1020 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 SMARCB1Q12824 385 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 ANKRD20A8PQ5CZ79 823 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 RNASEH2BQ5TBB1 312 aaKnown RBP19.16■□□□□ 0.66
RETREG3-205ENST00000586870 CLEC20AQ6ZU45 233 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 P3H4Q92791 437 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 FAF2Q96CS3 445 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 RTP3Q9BQQ7 232 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 S1PR5Q9H228 398 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 NINJ2Q9NZG7 142 aa19.16■□□□□ 0.66
RETREG3-205ENST00000586870 USP15Q9Y4E8 981 aaPredicted RBP19.16■□□□□ 0.66
RETREG3-205ENST00000586870 GRXCR2A6NFK2 248 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 ERICH4A6NGS2 130 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 SMAPO00193 183 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 APOL1O14791 398 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 RASGRF2O14827 1237 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 XYLBO75191 536 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 FBXO21O94952 628 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 AGTP01019 485 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 IFNB1P01574 187 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 HNRNPA1P09651 372 aaKnown RBP eCLIP19.15■□□□□ 0.66
RETREG3-205ENST00000586870 MTHFRP42898 656 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 PPP2R2AP63151 447 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 ADIGQ0VDE8 80 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 ZC3H12AQ5D1E8 599 aaKnown RBP19.15■□□□□ 0.66
RETREG3-205ENST00000586870 RTL10Q7L3V2 364 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 TCEAL8Q8IYN2 117 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 DEFB106AQ8N104 65 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 SMG7Q92540 1137 aaKnown RBP19.15■□□□□ 0.66
RETREG3-205ENST00000586870 LRRC4CQ9HCJ2 640 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 GPATCH2LQ9NWQ4 482 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 PRUNE2Q8WUY3 3088 aa19.15■□□□□ 0.66
RETREG3-205ENST00000586870 TLDC2A0PJX2 215 aa19.14■□□□□ 0.66
RETREG3-205ENST00000586870 RGS16O15492 202 aaPredicted RBP19.14■□□□□ 0.66
RETREG3-205ENST00000586870 NOS2P35228 1153 aa19.14■□□□□ 0.66
RETREG3-205ENST00000586870 MDH1P40925 334 aaKnown RBP19.14■□□□□ 0.66
RETREG3-205ENST00000586870 CDR1P51861 262 aa19.14■□□□□ 0.66
RETREG3-205ENST00000586870 MAGOHP61326 146 aaKnown RBP19.14■□□□□ 0.66
RETREG3-205ENST00000586870 YWHAZP63104 245 aaKnown RBP19.14■□□□□ 0.66
RETREG3-205ENST00000586870 DUSP4Q13115 394 aa19.14■□□□□ 0.66
RETREG3-205ENST00000586870 DPYSL2Q16555 572 aa19.14■□□□□ 0.66
RETREG3-205ENST00000586870 NFE2Q16621 373 aaPredicted RBP19.14■□□□□ 0.66
RETREG3-205ENST00000586870 KYNUQ16719 465 aa19.14■□□□□ 0.66
RETREG3-205ENST00000586870 SLC25A52Q3SY17 297 aa19.14■□□□□ 0.66
RETREG3-205ENST00000586870 INTS6LQ5JSJ4 861 aaKnown RBP19.14■□□□□ 0.66
RETREG3-205ENST00000586870 TJAP1Q5JTD0 557 aa19.14■□□□□ 0.66
RETREG3-205ENST00000586870 UBAP2Q5T6F2 1119 aaKnown RBP19.14■□□□□ 0.66
RETREG3-205ENST00000586870 SLC9A4Q6AI14 798 aa19.14■□□□□ 0.66
RETREG3-205ENST00000586870 GPR149Q86SP6 731 aa19.14■□□□□ 0.66
RETREG3-205ENST00000586870 FAM35AQ86V20 835 aa19.14■□□□□ 0.66
RETREG3-205ENST00000586870 PSTKQ8IV42 348 aaKnown RBP19.14■□□□□ 0.66
RETREG3-205ENST00000586870 SIX6OS1Q8N1H7 587 aa19.14■□□□□ 0.66
RETREG3-205ENST00000586870 ELMOD1Q8N336 334 aa19.14■□□□□ 0.66
RETREG3-205ENST00000586870 ATAD1Q8NBU5 361 aa19.14■□□□□ 0.66
RETREG3-205ENST00000586870 UHMK1Q8TAS1 419 aaKnown RBP19.14■□□□□ 0.66
RETREG3-205ENST00000586870 MYCBPAPQ8TBZ2 947 aa19.14■□□□□ 0.66
RETREG3-205ENST00000586870 C2orf15Q8WU43 125 aaKnown RBP19.14■□□□□ 0.66
RETREG3-205ENST00000586870 NECTIN4Q96NY8 510 aa19.14■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms