RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 FOXK2Q01167 660 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 LMNB2Q03252 620 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 BYSLQ13895 437 aaKnown RBP12.89□□□□□ -0.35
ERCC2-207ENST00000586441 USP39Q53GS9 565 aaKnown RBP12.89□□□□□ -0.35
ERCC2-207ENST00000586441 ADGRF1Q5T601 910 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 SFMBT2Q5VUG0 894 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 FYB2Q5VWT5 728 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 CEP68Q76N32 757 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 UNC45BQ8IWX7 931 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 NAT16Q8N8M0 369 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 ACRBPQ8NEB7 543 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 BAP1Q92560 729 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 CRACR2AQ9BSW2 395 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 LHX5Q9H2C1 402 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 DEF6Q9H4E7 631 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 DNAJC17Q9NVM6 304 aaKnown RBP12.89□□□□□ -0.35
ERCC2-207ENST00000586441 TMEM51Q9NW97 253 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 PCDHGC3Q9UN70 934 aa12.89□□□□□ -0.35
ERCC2-207ENST00000586441 SDK1Q7Z5N4 2213 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 IRAK2O43187 625 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 KLF8O95600 359 aaPredicted RBP12.88□□□□□ -0.35
ERCC2-207ENST00000586441 IGLV3-27P01718 113 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 SERPING1P05155 500 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 LCP1P13796 627 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 GNA15P30679 374 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 NTSR1P30989 418 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 TIE1P35590 1138 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 PTK2Q05397 1052 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 MESP2Q0VG99 397 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 MAPK8IP2Q13387 824 aaPredicted RBP12.88□□□□□ -0.35
ERCC2-207ENST00000586441 EIF4HQ15056 248 aaKnown RBP12.88□□□□□ -0.35
ERCC2-207ENST00000586441 CSRP2Q16527 193 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 MPPE1Q53F39 396 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 NUGGCQ68CJ6 796 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 SDE2Q6IQ49 451 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 PRR23BQ6ZRT6 265 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 TPGS1Q6ZTW0 290 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 ERMP1Q7Z2K6 904 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 DENND1CQ8IV53 801 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 KIAA2013Q8IYS2 634 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 DCLK2Q8N568 766 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 FAM160A2Q8N612 972 aaPredicted RBP12.88□□□□□ -0.35
ERCC2-207ENST00000586441 ALLCQ8N6M5 410 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 ZNF513Q8N8E2 541 aaPredicted RBP12.88□□□□□ -0.35
ERCC2-207ENST00000586441 ZNF557Q8N988 423 aaPredicted RBP12.88□□□□□ -0.35
ERCC2-207ENST00000586441 TXNDC5Q8NBS9 432 aaKnown RBP12.88□□□□□ -0.35
ERCC2-207ENST00000586441 OLIG1Q8TAK6 271 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 HHIPQ96QV1 700 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 BZW2Q9Y6E2 419 aaKnown RBP12.88□□□□□ -0.35
ERCC2-207ENST00000586441 CEP250Q9BV73 2442 aa12.88□□□□□ -0.35
ERCC2-207ENST00000586441 CTAGE9A4FU28 777 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 LRRC53A6NM62 1247 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 SGK1O00141 431 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 AKR1B10O60218 316 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 ADAM23O75077 832 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 RHOBTB1O94844 696 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 LCA5LO95447 670 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 GLI1P08151 1106 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 ARHGAP25P42331 645 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 ID4P47928 161 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 VAV2P52735 878 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 SEC13P55735 322 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 POLR2FP61218 127 aaKnown RBP12.87□□□□□ -0.35
ERCC2-207ENST00000586441 TUBB4BP68371 445 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 KIF5AQ12840 1032 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 MTA1Q13330 715 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 ENPP2Q13822 863 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 ELF2Q15723 593 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 ZNF569Q5MCW4 686 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 SPDYCQ5MJ68 293 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 C10orf76Q5T2E6 689 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 EMC10Q5UCC4 262 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 TMEM92Q6UXU6 159 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 SCUBE3Q8IX30 993 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 CCDC33Q8N5R6 958 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 MNS1Q8NEH6 495 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 NDRG1Q92597 394 aaKnown RBP12.87□□□□□ -0.35
ERCC2-207ENST00000586441 WDR24Q96S15 920 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 GABRG3Q99928 467 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 DDX50Q9BQ39 737 aaKnown RBP12.87□□□□□ -0.35
ERCC2-207ENST00000586441 GANQ9H2C0 597 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 SIX2Q9NPC8 291 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 ASNSD1Q9NWL6 643 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 DLL3Q9NYJ7 618 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 AIPL1Q9NZN9 384 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 TLR6Q9Y2C9 796 aa12.87□□□□□ -0.35
ERCC2-207ENST00000586441 PLXND1Q9Y4D7 1925 aa12.86□□□□□ -0.35
ERCC2-207ENST00000586441 EPHB6O15197 1021 aa12.86□□□□□ -0.35
ERCC2-207ENST00000586441 ZBTB24O43167 697 aaPredicted RBP12.86□□□□□ -0.35
ERCC2-207ENST00000586441 THAP12O43422 761 aa12.86□□□□□ -0.35
ERCC2-207ENST00000586441 EPN2O95208 641 aa12.86□□□□□ -0.35
ERCC2-207ENST00000586441 FYNP06241 537 aa12.86□□□□□ -0.35
ERCC2-207ENST00000586441 EIF4A3P38919 411 aaKnown RBP12.86□□□□□ -0.35
ERCC2-207ENST00000586441 PXNP49023 591 aaPredicted RBP12.86□□□□□ -0.35
ERCC2-207ENST00000586441 SLC11A2P49281 568 aa12.86□□□□□ -0.35
ERCC2-207ENST00000586441 RGS7P49802 495 aa12.86□□□□□ -0.35
ERCC2-207ENST00000586441 YWHAZP63104 245 aaKnown RBP12.86□□□□□ -0.35
ERCC2-207ENST00000586441 KDSRQ06136 332 aa12.86□□□□□ -0.35
ERCC2-207ENST00000586441 SRSF5Q13243 272 aaKnown RBP12.86□□□□□ -0.35
ERCC2-207ENST00000586441 PUM1Q14671 1186 aaKnown RBP eCLIP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms