RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 PITX1P78337 314 aaPredicted RBP8.98□□□□□ -0.97
ATG4D-202ENST00000585437 ENPP2Q13822 863 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 TAF5Q15542 800 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 CRY1Q16526 586 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 C2orf27AQ580R0 203 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 C10orf76Q5T2E6 689 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 ADGRF1Q5T601 910 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 OTUD1Q5VV17 481 aaPredicted RBP8.98□□□□□ -0.97
ATG4D-202ENST00000585437 TMEM92Q6UXU6 159 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 NYAP1Q6ZVC0 841 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 FAM183BPQ6ZVS7 135 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 KIAA0907Q7Z7F0 614 aaPredicted RBP8.98□□□□□ -0.97
ATG4D-202ENST00000585437 ZDHHC17Q8IUH5 632 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 UNC45BQ8IWX7 931 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 ALLCQ8N6M5 410 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.98□□□□□ -0.97
ATG4D-202ENST00000585437 TMEM35BQ8NCS4 154 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 MYRIPQ8NFW9 859 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 FAM149B1Q96BN6 582 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 PRICKLE1Q96MT3 831 aaPredicted RBP8.98□□□□□ -0.97
ATG4D-202ENST00000585437 NOX5Q96PH1 765 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 HHIPQ96QV1 700 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 SLC2A11Q9BYW1 496 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 PLK2Q9NYY3 685 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 SLC8A2Q9UPR5 921 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 NAALADL1Q9UQQ1 740 aa8.98□□□□□ -0.97
ATG4D-202ENST00000585437 EP300Q09472 2414 aaPredicted RBP8.97□□□□□ -0.97
ATG4D-202ENST00000585437 SPTBN4Q9H254 2564 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 DYNC1I1O14576 645 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 HRO43593 1189 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 ACSL4O60488 711 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 MFAP3LO75121 409 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 APBB3O95704 486 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 TRUB2O95900 331 aaKnown RBP8.97□□□□□ -0.97
ATG4D-202ENST00000585437 CYP1A1P04798 512 aaPredicted RBP8.97□□□□□ -0.97
ATG4D-202ENST00000585437 MMEP08473 750 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 CHRNB2P17787 502 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 TIE1P35590 1138 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 SGSHP51688 502 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 DGKEP52429 567 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 SLC6A3Q01959 620 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 UBXN1Q04323 297 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 EIF4HQ15056 248 aaKnown RBP8.97□□□□□ -0.97
ATG4D-202ENST00000585437 MPPE1Q53F39 396 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 EFHC1Q5JVL4 640 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 MPP7Q5T2T1 576 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 EMC10Q5UCC4 262 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 EGFLAMQ63HQ2 1017 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 LAIR1Q6GTX8 287 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 NADSYN1Q6IA69 706 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 NUDT18Q6ZVK8 323 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 BNIPLQ7Z465 357 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 TRMT11Q7Z4G4 463 aaKnown RBP8.97□□□□□ -0.97
ATG4D-202ENST00000585437 ZNF513Q8N8E2 541 aaPredicted RBP8.97□□□□□ -0.97
ATG4D-202ENST00000585437 TC2NQ8N9U0 490 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 TXNDC5Q8NBS9 432 aaKnown RBP8.97□□□□□ -0.97
ATG4D-202ENST00000585437 MDGA1Q8NFP4 955 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 OLIG1Q8TAK6 271 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 IPO4Q8TEX9 1081 aaKnown RBP8.97□□□□□ -0.97
ATG4D-202ENST00000585437 SLC20A1Q8WUM9 679 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 GAB3Q8WWW8 586 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 RUBCNQ92622 972 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 NT5C3BQ969T7 300 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 GABRG3Q99928 467 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 NUP58Q9BVL2 599 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 ADAM33Q9BZ11 813 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 NLRC4Q9NPP4 1024 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 CLEC4EQ9ULY5 219 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 CEP83Q9Y592 693 aa8.97□□□□□ -0.97
ATG4D-202ENST00000585437 A0A1W2PQF6 199 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 TBC1D3BA6NDS4 549 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 KCNU1A8MYU2 1149 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 TEX33O43247 280 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 GFPT2O94808 682 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 KLF8O95600 359 aaPredicted RBP8.96□□□□□ -0.98
ATG4D-202ENST00000585437 CYBBP04839 570 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 C7P10643 843 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 HLA-FP30511 346 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 NTSR1P30989 418 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 PXNP49023 591 aaPredicted RBP8.96□□□□□ -0.98
ATG4D-202ENST00000585437 SLC11A2P49281 568 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 GSCP56915 257 aaPredicted RBP8.96□□□□□ -0.98
ATG4D-202ENST00000585437 SNX16P57768 344 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 FMO1Q01740 532 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 CDR2Q01850 454 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 SRSF5Q13243 272 aaKnown RBP8.96□□□□□ -0.98
ATG4D-202ENST00000585437 GEN1Q17RS7 908 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 TSR1Q2NL82 804 aaKnown RBP8.96□□□□□ -0.98
ATG4D-202ENST00000585437 EOGTQ5NDL2 527 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 PIK3R6Q5UE93 754 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 TAF3Q5VWG9 929 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 E4F1Q66K89 784 aaPredicted RBP8.96□□□□□ -0.98
ATG4D-202ENST00000585437 HEATR6Q6AI08 1181 aaKnown RBP8.96□□□□□ -0.98
ATG4D-202ENST00000585437 ARCQ7LC44 396 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 ANKS1BQ7Z6G8 1248 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 XYLT1Q86Y38 959 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 TMTC1Q8IUR5 882 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 DEFB106AQ8N104 65 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 CCDC33Q8N5R6 958 aa8.96□□□□□ -0.98
ATG4D-202ENST00000585437 TSTD1Q8NFU3 115 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms