RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 MPP7Q5T2T1 576 aa15.1■□□□□ 0.01
SDF2-202ENST00000585428 KRBA2Q6ZNG9 492 aa15.1■□□□□ 0.01
SDF2-202ENST00000585428 FAM124AQ86V42 546 aa15.1■□□□□ 0.01
SDF2-202ENST00000585428 ZC3H3Q8IXZ2 948 aaKnown RBP15.1■□□□□ 0.01
SDF2-202ENST00000585428 RHBDD1Q8TEB9 315 aa15.1■□□□□ 0.01
SDF2-202ENST00000585428 CYB5D2Q8WUJ1 264 aa15.1■□□□□ 0.01
SDF2-202ENST00000585428 KCTD13Q8WZ19 329 aa15.1■□□□□ 0.01
SDF2-202ENST00000585428 SPATA32Q96LK8 384 aa15.1■□□□□ 0.01
SDF2-202ENST00000585428 CDC6Q99741 560 aa15.1■□□□□ 0.01
SDF2-202ENST00000585428 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.1■□□□□ 0.01
SDF2-202ENST00000585428 FLRT2O43155 660 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 GABBR2O75899 941 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 LATS1O95835 1130 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 MXI1P50539 228 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 RPS14P62263 151 aaKnown RBP15.09■□□□□ 0.01
SDF2-202ENST00000585428 ARID5AQ03989 594 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 ZBTB16Q05516 673 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 SUZ12Q15022 739 aaKnown RBP15.09■□□□□ 0.01
SDF2-202ENST00000585428 CBWD6Q4V339 395 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 PKDCCQ504Y2 493 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 CBWD3Q5JTY5 395 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 CBWD5Q5RIA9 395 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 C19orf48Q6RUI8 117 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 CHST9Q7L1S5 443 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 HSCBQ8IWL3 235 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 WFIKKN2Q8TEU8 576 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 EDEM1Q92611 657 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 BIRC7Q96CA5 298 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 LMLNQ96KR4 655 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 LHX5Q9H2C1 402 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 LRRC4Q9HBW1 653 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 ABCC13Q9NSE7 274 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 ABCB8Q9NUT2 735 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 DKK4Q9UBT3 224 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 TSPAN16Q9UKR8 245 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 KIAA1257Q9ULG3 409 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 ANKRD6Q9Y2G4 727 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 SNX11Q9Y5W9 270 aa15.09■□□□□ 0.01
SDF2-202ENST00000585428 PKD1L2Q7Z442 2459 aa15.08■□□□□ 0.01
SDF2-202ENST00000585428 A0A1W2PQ27 194 aa15.08■□□□□ 0
SDF2-202ENST00000585428 A0A1W2PQ64 194 aa15.08■□□□□ 0
SDF2-202ENST00000585428 CETN3O15182 167 aa15.08■□□□□ 0
SDF2-202ENST00000585428 ZNF202O95125 648 aa15.08■□□□□ 0
SDF2-202ENST00000585428 DLDP09622 509 aaKnown RBP15.08■□□□□ 0
SDF2-202ENST00000585428 PABPC1P11940 636 aaKnown RBP15.08■□□□□ 0
SDF2-202ENST00000585428 SGSHP51688 502 aa15.08■□□□□ 0
SDF2-202ENST00000585428 BCAT1P54687 386 aa15.08■□□□□ 0
SDF2-202ENST00000585428 BST2Q10589 180 aaKnown RBP15.08■□□□□ 0
SDF2-202ENST00000585428 ACAP1Q15027 740 aa15.08■□□□□ 0
SDF2-202ENST00000585428 GOLGA7BQ2TAP0 167 aa15.08■□□□□ 0
SDF2-202ENST00000585428 FNDC3BQ53EP0 1204 aaKnown RBP15.08■□□□□ 0
SDF2-202ENST00000585428 SGO2Q562F6 1265 aa15.08■□□□□ 0
SDF2-202ENST00000585428 KCNT1Q5JUK3 1230 aa15.08■□□□□ 0
SDF2-202ENST00000585428 PIK3R6Q5UE93 754 aa15.08■□□□□ 0
SDF2-202ENST00000585428 UBR7Q8N806 425 aa15.08■□□□□ 0
SDF2-202ENST00000585428 ZNF366Q8N895 744 aa15.08■□□□□ 0
SDF2-202ENST00000585428 SPRYD3Q8NCJ5 442 aa15.08■□□□□ 0
SDF2-202ENST00000585428 UBA3Q8TBC4 463 aa15.08■□□□□ 0
SDF2-202ENST00000585428 MDM1Q8TC05 714 aa15.08■□□□□ 0
SDF2-202ENST00000585428 RNF139Q8WU17 664 aa15.08■□□□□ 0
SDF2-202ENST00000585428 SLC35F5Q8WV83 523 aa15.08■□□□□ 0
SDF2-202ENST00000585428 IPO9Q96P70 1041 aaKnown RBP15.08■□□□□ 0
SDF2-202ENST00000585428 ORAI3Q9BRQ5 295 aa15.08■□□□□ 0
SDF2-202ENST00000585428 IRX2Q9BZI1 471 aaPredicted RBP15.08■□□□□ 0
SDF2-202ENST00000585428 BTBD1Q9H0C5 482 aa15.08■□□□□ 0
SDF2-202ENST00000585428 FBRSQ9HAH7 460 aa15.08■□□□□ 0
SDF2-202ENST00000585428 TM9SF3Q9HD45 589 aa15.08■□□□□ 0
SDF2-202ENST00000585428 CNGB3Q9NQW8 809 aa15.08■□□□□ 0
SDF2-202ENST00000585428 SUN2Q9UH99 717 aa15.08■□□□□ 0
SDF2-202ENST00000585428 GGA2Q9UJY4 613 aa15.08■□□□□ 0
SDF2-202ENST00000585428 BTBD3Q9Y2F9 522 aa15.08■□□□□ 0
SDF2-202ENST00000585428 KCNK3O14649 394 aa15.07■□□□□ 0
SDF2-202ENST00000585428 PCDHGA12O60330 932 aa15.07■□□□□ 0
SDF2-202ENST00000585428 IGLV3-27P01718 113 aa15.07■□□□□ 0
SDF2-202ENST00000585428 ATP5BP06576 529 aaKnown RBP15.07■□□□□ 0
SDF2-202ENST00000585428 EPB41P11171 864 aaKnown RBP15.07■□□□□ 0
SDF2-202ENST00000585428 VDRP11473 427 aa15.07■□□□□ 0
SDF2-202ENST00000585428 CD27P26842 260 aa15.07■□□□□ 0
SDF2-202ENST00000585428 GRIA4P48058 902 aa15.07■□□□□ 0
SDF2-202ENST00000585428 KRT85P78386 507 aa15.07■□□□□ 0
SDF2-202ENST00000585428 ADIGQ0VDE8 80 aa15.07■□□□□ 0
SDF2-202ENST00000585428 CAMK2BQ13554 666 aa15.07■□□□□ 0
SDF2-202ENST00000585428 CUL2Q13617 745 aa15.07■□□□□ 0
SDF2-202ENST00000585428 MBLAC2Q68D91 279 aa15.07■□□□□ 0
SDF2-202ENST00000585428 CACUL1Q86Y37 369 aa15.07■□□□□ 0
SDF2-202ENST00000585428 SMYD4Q8IYR2 804 aaPredicted RBP15.07■□□□□ 0
SDF2-202ENST00000585428 AHI1Q8N157 1196 aa15.07■□□□□ 0
SDF2-202ENST00000585428 SPOCK2Q92563 424 aa15.07■□□□□ 0
SDF2-202ENST00000585428 IGSF8Q969P0 613 aa15.07■□□□□ 0
SDF2-202ENST00000585428 AZIN2Q96A70 460 aa15.07■□□□□ 0
SDF2-202ENST00000585428 TTC17Q96AE7 1141 aa15.07■□□□□ 0
SDF2-202ENST00000585428 MYO19Q96H55 970 aa15.07■□□□□ 0
SDF2-202ENST00000585428 GOLPH3LQ9H4A5 285 aa15.07■□□□□ 0
SDF2-202ENST00000585428 HESX1Q9UBX0 185 aa15.07■□□□□ 0
SDF2-202ENST00000585428 MYH10P35580 1976 aa15.07■□□□□ 0
SDF2-202ENST00000585428 ITPR1Q14643 2758 aa15.06■□□□□ 0
SDF2-202ENST00000585428 GOLGA6L7A0A1B0GV03 622 aa15.06■□□□□ 0
SDF2-202ENST00000585428 O00370 1275 aa15.06■□□□□ 0
SDF2-202ENST00000585428 MSI1O43347 362 aaKnown RBP15.06■□□□□ 0
SDF2-202ENST00000585428 TNFSF14O43557 240 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms