RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 NDUFAF1Q9Y375 327 aa13.57□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TMEM191CA6NGB0 347 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CCR1P32246 355 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CLK2P49760 499 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 SOX10P56693 466 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 OSCP1Q8WVF1 389 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 SLC5A5Q92911 643 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 OMA1Q96E52 524 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 BDH2Q9BUT1 245 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 RIBC2Q9H4K1 309 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 PCDH9Q9HC56 1237 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ARHGAP20Q9P2F6 1191 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 LIMD1Q9UGP4 676 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 DSEQ9UL01 958 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 H3BN98 237 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 PSMD12O00232 456 aaPredicted RBP13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 SNPHO15079 494 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 RAG1P15918 1043 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 GRK4P32298 578 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 MAPK10P53779 464 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 PRKAA1Q13131 559 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 FGD3Q5JSP0 725 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 MARC1Q5VT66 337 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CYP2R1Q6VVX0 501 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 KCNMB4Q86W47 210 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 SYTL1Q8IYJ3 562 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 FBXO39Q8N4B4 442 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 POU5F2Q8N7G0 328 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TMC2Q8TDI7 906 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TCP10LQ8TDR4 215 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 COQ7Q99807 217 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TIMM13Q9Y5L4 95 aaPredicted RBP13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CCDC154A6NI56 674 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CLOCKO15516 846 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 SYNCRIPO60506 623 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 SERPINE1P05121 402 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CNPP09543 421 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 KLRK1P26718 216 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 STX4Q12846 297 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ZNF720Q7Z2F6 126 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ELMO3Q96BJ8 720 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 RNF145Q96MT1 663 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 PHACTR1Q9C0D0 580 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CLEC4MQ9H2X3 399 aaPredicted RBP13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 SPON1Q9HCB6 807 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 FCHO1O14526 889 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 SEC22BO75396 215 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ITGAXP20702 1163 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 SFSWAPQ12872 951 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TMPRSS6Q8IU80 811 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CEP44Q9C0F1 390 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 PAIP1Q9H074 479 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 DDX18Q9NVP1 670 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 PLA2G4CQ9UP65 541 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 PHGDHO43175 533 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CYP2A7P20853 494 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 MGAT1P26572 445 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 SREBF1P36956 1147 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 EPHB3P54753 998 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 BOP1Q14137 746 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 GRTP1Q5TC63 336 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ZSCAN18Q8TBC5 510 aaPredicted RBP13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 OXNAD1Q96HP4 312 aaPredicted RBP13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 OLFM1Q99784 485 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 BTBD10Q9BSF8 475 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 DCLK3Q9C098 648 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 COPG2Q9UBF2 871 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CHKBQ9Y259 395 aa13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TDRKHQ9Y2W6 561 aaKnown RBP13.56□□□□□ -0.24
RAB11FIP4-210ENST00000585058 A0A087WZ62 844 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 DNAJB2P25686 324 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 PTENP60484 403 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CCDC153Q494R4 210 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 KLHL17Q6TDP4 642 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CES3Q6UWW8 571 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 GATAD2AQ86YP4 633 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 SVOPQ8N4V2 548 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 TATDN2Q93075 761 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 FDXACB1Q9BRP7 624 aaPredicted RBP13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ARMC7Q9H6L4 198 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ZMYM5Q9UJ78 669 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 IPPQ9Y573 584 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 MAGEB16A2A368 324 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ASNA1O43681 348 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 PABPC1P11940 636 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 H2AFXP16104 143 aaPredicted RBP13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ALOX12P18054 663 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CDH17Q12864 832 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 ZSWIM7Q19AV6 140 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 FIGNQ5HY92 759 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 C3orf67Q6ZVT6 689 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 STK32CQ86UX6 486 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CACTIN-AS1Q8N1I8 211 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 UBASH3BQ8TF42 649 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 CAVIN3Q969G5 261 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 A1CFQ9NQ94 594 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 DDX43Q9NXZ2 648 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 MRPL42Q9Y6G3 142 aaKnown RBP13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 PTGES3LE9PB15 166 aa13.55□□□□□ -0.24
RAB11FIP4-210ENST00000585058 LDLRP01130 860 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms