RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 ADHFE1Q8IWW8 467 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 C11orf44Q8N8P7 122 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 RUNDC1Q96C34 613 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 P2RY11Q96G91 374 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 ZDHHC12Q96GR4 267 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 GPATCH3Q96I76 525 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 VPS50Q96JG6 964 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 FCRL5Q96RD9 977 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 STK31Q9BXU1 1019 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 NUAK2Q9H093 628 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 CDH19Q9H159 772 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 USP29Q9HBJ7 922 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 AGO4Q9HCK5 861 aaKnown RBP3.41□□□□□ -1.86
VAPA-208ENST00000584796 MLXIPLQ9NP71 852 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 SACM1LQ9NTJ5 587 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 DNAJB11Q9UBS4 358 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 L1RE1Q9UN81 338 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 SLC27A6Q9Y2P4 619 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 NOP58Q9Y2X3 529 aaKnown RBP3.41□□□□□ -1.86
VAPA-208ENST00000584796 BLMP54132 1417 aaPredicted RBP3.41□□□□□ -1.86
VAPA-208ENST00000584796 NRKQ7Z2Y5 1582 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 SHANK3Q9BYB0 1731 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 IFT172Q9UG01 1749 aa3.41□□□□□ -1.86
VAPA-208ENST00000584796 COL15A1P39059 1388 aa3.4□□□□□ -1.86
VAPA-208ENST00000584796 EME2A4GXA9 379 aaPredicted RBP3.4□□□□□ -1.87
VAPA-208ENST00000584796 ZNF814B7Z6K7 855 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 T-ENOLP0DO92 83 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 BRAFP15056 766 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 YY1P25490 414 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 RBL1P28749 1068 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 HTR7P34969 479 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 CDKN2AP42771 156 aaKnown RBP3.4□□□□□ -1.87
VAPA-208ENST00000584796 RAB27AP51159 221 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 JAK3P52333 1124 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 EIF4A1P60842 406 aaKnown RBP3.4□□□□□ -1.87
VAPA-208ENST00000584796 RPS16P62249 146 aaKnown RBP3.4□□□□□ -1.87
VAPA-208ENST00000584796 STK3Q13188 491 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 CNN3Q15417 329 aaKnown RBP3.4□□□□□ -1.87
VAPA-208ENST00000584796 CNGA2Q16280 664 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 C18orf65Q6ZTR6 163 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.4□□□□□ -1.87
VAPA-208ENST00000584796 FAM71DQ8N9W8 422 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 B4GALNT2Q8NHY0 566 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 SMCR8Q8TEV9 937 aaPredicted RBP3.4□□□□□ -1.87
VAPA-208ENST00000584796 TRMT61AQ96FX7 289 aaKnown RBP3.4□□□□□ -1.87
VAPA-208ENST00000584796 NLRP4Q96MN2 994 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 HIST1H2AAQ96QV6 131 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 SELENOOQ9BVL4 669 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 VPS45Q9NRW7 570 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 TMEM45AQ9NWC5 275 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 COL20A1Q9P218 1284 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 MID2Q9UJV3 735 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 HDAC9Q9UKV0 1011 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 PROCRQ9UNN8 238 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 IQGAP3Q86VI3 1631 aa3.4□□□□□ -1.87
VAPA-208ENST00000584796 SLIT2O94813 1529 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 FMN2Q9NZ56 1722 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 ABCC5O15440 1437 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 ADGRL3Q9HAR2 1447 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 C16orf96A6NNT2 1141 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 C4orf47A7E2U8 309 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 PRSS44E7EML9 344 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 RAB27BO00194 218 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 CA12O43570 354 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 CTNND1O60716 968 aaKnown RBP3.39□□□□□ -1.87
VAPA-208ENST00000584796 INMTO95050 263 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 EPN2O95208 641 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 TPH1P17752 444 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 NTSR1P30989 418 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 HOXA7P31268 230 aaPredicted RBP3.39□□□□□ -1.87
VAPA-208ENST00000584796 GALNSP34059 522 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 IL6STP40189 918 aaPredicted RBP3.39□□□□□ -1.87
VAPA-208ENST00000584796 WDR5P61964 334 aaKnown RBP3.39□□□□□ -1.87
VAPA-208ENST00000584796 CCDC15Q0P6D6 951 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 DNASE1L3Q13609 305 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 C3orf38Q5JPI3 329 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 MANEAQ5SRI9 462 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 PLAG1Q6DJT9 500 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 GRHL2Q6ISB3 625 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 MZT2AQ6P582 158 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 FAM57BQ71RH2 274 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 TFAP2DQ7Z6R9 452 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 YAF2Q8IY57 180 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 STAG1Q8WVM7 1258 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 SLC25A28Q96A46 364 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 CINPQ9BW66 212 aaPredicted RBP3.39□□□□□ -1.87
VAPA-208ENST00000584796 SCNM1Q9BWG6 230 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 GATA5Q9BWX5 397 aaPredicted RBP3.39□□□□□ -1.87
VAPA-208ENST00000584796 ZCWPW1Q9H0M4 648 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 CHST8Q9H2A9 424 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 MRPL44Q9H9J2 332 aaKnown RBP3.39□□□□□ -1.87
VAPA-208ENST00000584796 ARL8BQ9NVJ2 186 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 ZNF112Q9UJU3 913 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 CAPN11Q9UMQ6 739 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 PCDHA12Q9UN75 941 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 EID1Q9Y6B2 187 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 SIRT4Q9Y6E7 314 aaPredicted RBP3.39□□□□□ -1.87
VAPA-208ENST00000584796 C1orf167Q5SNV9 1468 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 TUBGCP6Q96RT7 1819 aa3.39□□□□□ -1.87
VAPA-208ENST00000584796 TRPM3Q9HCF6 1732 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms