RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 CD70P32970 193 aa18.73■□□□□ 0.59
SRSF1-208ENST00000584773 RING1Q06587 406 aa18.73■□□□□ 0.59
SRSF1-208ENST00000584773 RAPGEF1Q13905 1077 aa18.73■□□□□ 0.59
SRSF1-208ENST00000584773 NUGGCQ68CJ6 796 aa18.73■□□□□ 0.59
SRSF1-208ENST00000584773 CHST9Q7L1S5 443 aa18.73■□□□□ 0.59
SRSF1-208ENST00000584773 LPCAT2Q7L5N7 544 aa18.73■□□□□ 0.59
SRSF1-208ENST00000584773 UNC45BQ8IWX7 931 aa18.73■□□□□ 0.59
SRSF1-208ENST00000584773 ZNF366Q8N895 744 aa18.73■□□□□ 0.59
SRSF1-208ENST00000584773 SERPINB11Q96P15 392 aa18.73■□□□□ 0.59
SRSF1-208ENST00000584773 SLC2A11Q9BYW1 496 aa18.73■□□□□ 0.59
SRSF1-208ENST00000584773 MKRN2Q9H000 416 aaKnown RBP18.73■□□□□ 0.59
SRSF1-208ENST00000584773 TMEM74BQ9NUR3 256 aa18.73■□□□□ 0.59
SRSF1-208ENST00000584773 PCDHGC3Q9UN70 934 aa18.73■□□□□ 0.59
SRSF1-208ENST00000584773 TLR6Q9Y2C9 796 aa18.73■□□□□ 0.59
SRSF1-208ENST00000584773 SART1O43290 800 aaKnown RBP18.72■□□□□ 0.59
SRSF1-208ENST00000584773 ERBB2P04626 1255 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 KCNA4P22459 653 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 SLC11A2P49281 568 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 KLK7P49862 253 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 RPS24P62847 133 aaKnown RBP18.72■□□□□ 0.59
SRSF1-208ENST00000584773 RPL6Q02878 288 aaKnown RBP18.72■□□□□ 0.59
SRSF1-208ENST00000584773 ENPP2Q13822 863 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 DRAP1Q14919 205 aaPredicted RBP18.72■□□□□ 0.59
SRSF1-208ENST00000584773 ZC3H12AQ5D1E8 599 aaKnown RBP18.72■□□□□ 0.59
SRSF1-208ENST00000584773 TCP11X2Q5H9J9 407 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 STPG1Q5TH74 334 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 C11orf57Q6ZUT1 292 aaPredicted RBP18.72■□□□□ 0.59
SRSF1-208ENST00000584773 FAM183BPQ6ZVS7 135 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 ADIPOR2Q86V24 386 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 CFAP52Q8N1V2 620 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 UCMAQ8WVF2 138 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 PPP1R13BQ96KQ4 1090 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 EDEM2Q9BV94 578 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 POPDC2Q9HBU9 364 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 FSCN3Q9NQT6 498 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 GGA2Q9UJY4 613 aa18.72■□□□□ 0.59
SRSF1-208ENST00000584773 PI4KAP42356 2102 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 SYNJ2BP-COX16A0A087WUM0 186 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 LNP1A1A4G5 178 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 IRAK2O43187 625 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 TRUB2O95900 331 aaKnown RBP18.71■□□□□ 0.59
SRSF1-208ENST00000584773 IGLV3-25P01717 112 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 PABPC1P11940 636 aaKnown RBP18.71■□□□□ 0.59
SRSF1-208ENST00000584773 ITPKAP23677 461 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 YWHAZP63104 245 aaKnown RBP18.71■□□□□ 0.59
SRSF1-208ENST00000584773 FOXK2Q01167 660 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 PTK2Q05397 1052 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 PTPN20Q4JDL3 420 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 KLHDC7AQ5VTJ3 777 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 MMS22LQ6ZRQ5 1243 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 RBM43Q6ZSC3 357 aaKnown RBP18.71■□□□□ 0.59
SRSF1-208ENST00000584773 FAM71AQ8IYT1 594 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 DEFB106AQ8N104 65 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 GBP4Q96PP9 640 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 COX16Q9P0S2 106 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 ADAMTS9Q9P2N4 1935 aa18.71■□□□□ 0.59
SRSF1-208ENST00000584773 CNOT1A5YKK6 2376 aaKnown RBP18.7■□□□□ 0.58
SRSF1-208ENST00000584773 FOXD2O60548 495 aaPredicted RBP18.7■□□□□ 0.58
SRSF1-208ENST00000584773 EPHX1P07099 455 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 NUMBP49757 651 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 COPAP53621 1224 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 ZNF445P59923 1031 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 IRX4P78413 519 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 STARD3Q14849 445 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 EIF4HQ15056 248 aaKnown RBP18.7■□□□□ 0.58
SRSF1-208ENST00000584773 DCAF6Q58WW2 860 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 TAF3Q5VWG9 929 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 LYSMD4Q5XG99 296 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 RAP1GAP2Q684P5 730 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 RNF43Q68DV7 783 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 OR6B2Q6IFH4 312 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 SERPINA13PQ6UXR4 307 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 SLC41A1Q8IVJ1 513 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.7■□□□□ 0.582e-7■■□□□ 13.8
SRSF1-208ENST00000584773 LMLNQ96KR4 655 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 NAA15Q9BXJ9 866 aaKnown RBP18.7■□□□□ 0.58
SRSF1-208ENST00000584773 VPS16Q9H269 839 aa18.7■□□□□ 0.58
SRSF1-208ENST00000584773 ZBTB24O43167 697 aaPredicted RBP18.69■□□□□ 0.58
SRSF1-208ENST00000584773 KRT9P35527 623 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 LIMK1P53667 647 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 ARID5AQ03989 594 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 LMAN2Q12907 356 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 NNTQ13423 1086 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 BYSLQ13895 437 aaKnown RBP18.69■□□□□ 0.58
SRSF1-208ENST00000584773 KRT31Q15323 416 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 PTPRNQ16849 979 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 FNDC3BQ53EP0 1204 aaKnown RBP18.69■□□□□ 0.58
SRSF1-208ENST00000584773 FSCBQ5H9T9 825 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 MS4A13Q5J8X5 152 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 PPM1JQ5JR12 505 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 CDKAL1Q5VV42 579 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 MBLAC2Q68D91 279 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 IL31Q6EBC2 164 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 OLFML1Q6UWY5 402 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 BEND5Q7L4P6 421 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 KIAA0907Q7Z7F0 614 aaPredicted RBP18.69■□□□□ 0.58
SRSF1-208ENST00000584773 CIR1Q86X95 450 aaPredicted RBP18.69■□□□□ 0.58
SRSF1-208ENST00000584773 MFN1Q8IWA4 741 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 LGI2Q8N0V4 545 aa18.69■□□□□ 0.58
SRSF1-208ENST00000584773 CARNMT1Q8N4J0 409 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms