RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 KAT7O95251 611 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 IRF1P10914 325 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 GRIA2P42262 883 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 SEC13P55735 322 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 SLC8A3P57103 927 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 YWHAEP62258 255 aaKnown RBP11.69□□□□□ -0.54
CCDC47-206ENST00000584112 TLE1Q04724 770 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 GRIK2Q13002 908 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 MAP7D1Q3KQU3 841 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 LY6G5CQ5SRR4 150 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 PPP1R26Q5T8A7 1209 aaPredicted RBP11.69□□□□□ -0.54
CCDC47-206ENST00000584112 KLHDC10Q6PID8 442 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 NUDT18Q6ZVK8 323 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 HTR3DQ70Z44 454 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 GPRIN1Q7Z2K8 1008 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 ZC3H3Q8IXZ2 948 aaKnown RBP11.69□□□□□ -0.54
CCDC47-206ENST00000584112 ELOA2Q8IYF1 753 aaPredicted RBP11.69□□□□□ -0.54
CCDC47-206ENST00000584112 CCDC33Q8N5R6 958 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 RHBDD1Q8TEB9 315 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 SEMA4DQ92854 862 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 HEXIM2Q96MH2 286 aaKnown RBP11.69□□□□□ -0.54
CCDC47-206ENST00000584112 CDK5RAP1Q96SZ6 601 aaKnown RBP11.69□□□□□ -0.54
CCDC47-206ENST00000584112 ARHGEF4Q9NR80 690 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 SPHK2Q9NRA0 654 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 CISHQ9NSE2 258 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 PLEKHB1Q9UF11 243 aaPredicted RBP11.69□□□□□ -0.54
CCDC47-206ENST00000584112 ARMCX3Q9UH62 379 aaPredicted RBP11.69□□□□□ -0.54
CCDC47-206ENST00000584112 MMP17Q9ULZ9 603 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 SPG11Q96JI7 2443 aa11.69□□□□□ -0.54
CCDC47-206ENST00000584112 A0A0A0MRY4 1105 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 CYP26A1O43174 497 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 HOXC11O43248 304 aaPredicted RBP11.68□□□□□ -0.54
CCDC47-206ENST00000584112 ALDH1A2O94788 518 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 RARGP13631 454 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 JUPP14923 745 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 TNFRSF4P43489 277 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 KIF11P52732 1056 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 KDSRQ06136 332 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 RTP5Q14D33 572 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 ZNF394Q53GI3 561 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 ANKRD40Q6AI12 368 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 TMEM92Q6UXU6 159 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 CCDC186Q7Z3E2 898 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 BBS7Q8IWZ6 715 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 ZNF276Q8N554 614 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 SLC4A11Q8NBS3 891 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 DHTKD1Q96HY7 919 aaPredicted RBP11.68□□□□□ -0.54
CCDC47-206ENST00000584112 KLF16Q9BXK1 252 aaPredicted RBP11.68□□□□□ -0.54
CCDC47-206ENST00000584112 UBXN6Q9BZV1 441 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 METTL14Q9HCE5 456 aaKnown RBP11.68□□□□□ -0.54
CCDC47-206ENST00000584112 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCDC47-206ENST00000584112 NAGPAQ9UK23 515 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCDC47-206ENST00000584112 COQ4Q9Y3A0 265 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 CKAP5Q14008 2032 aa11.68□□□□□ -0.54
CCDC47-206ENST00000584112 A0A1W2PQH9 124 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 TBX18O95935 607 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 RALAP11233 206 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 TNFRSF8P28908 595 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 PLA2G4AP47712 749 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 SLC6A11P48066 632 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 PGFP49763 221 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 RAD23BP54727 409 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 RPL6Q02878 288 aaKnown RBP11.67□□□□□ -0.54
CCDC47-206ENST00000584112 ZNF33AQ06730 810 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 CUL2Q13617 745 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 CRY1Q16526 586 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 PTPRNQ16849 979 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 ANO4Q32M45 955 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 CBWD6Q4V339 395 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 CBWD3Q5JTY5 395 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 EOGTQ5NDL2 527 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 CBWD5Q5RIA9 395 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 C10orf120Q5SQS8 335 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 BROXQ5VW32 411 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 ARHGAP17Q68EM7 881 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 TRMT11Q7Z4G4 463 aaKnown RBP11.67□□□□□ -0.54
CCDC47-206ENST00000584112 C12orf40Q86WS4 652 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 TMPRSS12Q86WS5 348 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 SLC41A1Q8IVJ1 513 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 ETFBKMTQ8IXQ9 262 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 ARHGAP18Q8N392 663 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 KCNV2Q8TDN2 545 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 ERCC4Q92889 916 aaPredicted RBP11.67□□□□□ -0.54
CCDC47-206ENST00000584112 CEP63Q96MT8 703 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 XPO6Q96QU8 1125 aaKnown RBP11.67□□□□□ -0.54
CCDC47-206ENST00000584112 CDC6Q99741 560 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 OSER1Q9NX31 292 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 CLIC5Q9NZA1 410 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 DEC1Q9P2X7 70 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 FNDC3AQ9Y2H6 1198 aaKnown RBP11.67□□□□□ -0.54
CCDC47-206ENST00000584112 USP3Q9Y6I4 520 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 HIVEP1P15822 2718 aa11.67□□□□□ -0.54
CCDC47-206ENST00000584112 TRIM49BA6NDI0 452 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 TBC1D3BA6NDS4 549 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 TULP3O75386 442 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 KLF8O95600 359 aaPredicted RBP11.66□□□□□ -0.54
CCDC47-206ENST00000584112 TBXAS1P24557 533 aaPredicted RBP11.66□□□□□ -0.54
CCDC47-206ENST00000584112 TIE1P35590 1138 aa11.66□□□□□ -0.54
CCDC47-206ENST00000584112 PMS1P54277 932 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms