RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 ABCB4P21439 1286 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 GPD2P43304 727 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 SEC13P55735 322 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 GSCP56915 257 aaPredicted RBP18.67■□□□□ 0.58
SNX11-212ENST00000583320 AMPD2Q01433 879 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 PTP4A2Q12974 167 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 ORC1Q13415 861 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 ZNF77Q15935 545 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 TAF12Q16514 161 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 PKDCCQ504Y2 493 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 PPP1R26Q5T8A7 1209 aaPredicted RBP18.67■□□□□ 0.58
SNX11-212ENST00000583320 SDHAF4Q5VUM1 108 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 CC2D1AQ6P1N0 951 aaPredicted RBP18.67■□□□□ 0.58
SNX11-212ENST00000583320 PASD1Q8IV76 773 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 THEM5Q8N1Q8 247 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 SLC35F6Q8N357 371 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 CPA6Q8N4T0 437 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 WDTC1Q8N5D0 677 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 USP33Q8TEY7 942 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 STK32AQ8WU08 396 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 CPA5Q8WXQ8 436 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 ZNF653Q96CK0 615 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 WDR24Q96S15 920 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 SLC22A12Q96S37 553 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 HNRNPABQ99729 332 aaKnown RBP18.67■□□□□ 0.58
SNX11-212ENST00000583320 MIS12Q9H081 205 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 ABI2Q9NYB9 513 aaPredicted RBP18.67■□□□□ 0.58
SNX11-212ENST00000583320 ADAM22Q9P0K1 906 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 HESX1Q9UBX0 185 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 EVLQ9UI08 416 aaPredicted RBP18.67■□□□□ 0.58
SNX11-212ENST00000583320 DNAI1Q9UI46 699 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 TSPAN16Q9UKR8 245 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 STRIP2Q9ULQ0 834 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 PAXBP1Q9Y5B6 917 aa18.67■□□□□ 0.58
SNX11-212ENST00000583320 ATXN2Q99700 1313 aaKnown RBP18.67■□□□□ 0.58
SNX11-212ENST00000583320 M0QYV0 167 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 MOCS3O95396 460 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 ZIC2O95409 532 aaPredicted RBP18.66■□□□□ 0.58
SNX11-212ENST00000583320 CASQ1P31415 396 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 PTGER3P43115 390 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 NAP1L1P55209 391 aaKnown RBP18.66■□□□□ 0.58
SNX11-212ENST00000583320 USP4Q13107 963 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 ZNF268Q14587 947 aaPredicted RBP18.66■□□□□ 0.58
SNX11-212ENST00000583320 EML3Q32P44 896 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 C2orf27AQ580R0 203 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 C11orf74Q86VG3 221 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 MON1AQ86VX9 555 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 ERICH1Q86X53 443 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 PROSER1Q86XN7 944 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 DNAAF5Q86Y56 855 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 C12orf29Q8N999 325 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 ANKRD52Q8NB46 1076 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 C1orf131Q8NDD1 294 aaKnown RBP18.66■□□□□ 0.58
SNX11-212ENST00000583320 TTC16Q8NEE8 873 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 SLC35G2Q8TBE7 412 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 RLN3Q8WXF3 142 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 ARHGEF26Q96DR7 871 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 SYT15Q9BQS2 421 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 DPEP3Q9H4B8 488 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 CYLDQ9NQC7 956 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 TMLHEQ9NVH6 421 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 DUS2Q9NX74 493 aaKnown RBP18.66■□□□□ 0.58
SNX11-212ENST00000583320 WDR35Q9P2L0 1181 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 CNOT8Q9UFF9 292 aaKnown RBP18.66■□□□□ 0.58
SNX11-212ENST00000583320 ZMYM5Q9UJ78 669 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 GPSM3Q9Y4H4 160 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 ADAMTS9Q9P2N4 1935 aa18.66■□□□□ 0.58
SNX11-212ENST00000583320 K7EQS6 105 aa18.65■□□□□ 0.58
SNX11-212ENST00000583320 ENGP17813 658 aa18.65■□□□□ 0.58
SNX11-212ENST00000583320 DDX6P26196 483 aaKnown RBP eCLIP18.65■□□□□ 0.58
SNX11-212ENST00000583320 NOP2P46087 812 aaKnown RBP18.65■□□□□ 0.58
SNX11-212ENST00000583320 BCAT1P54687 386 aa18.65■□□□□ 0.58
SNX11-212ENST00000583320 SNX16P57768 344 aa18.65■□□□□ 0.58
SNX11-212ENST00000583320 MAPRE1Q15691 268 aaKnown RBP18.65■□□□□ 0.58
SNX11-212ENST00000583320 GOLGA7BQ2TAP0 167 aa18.65■□□□□ 0.58
SNX11-212ENST00000583320 SFTPA1Q8IWL2 248 aa18.65■□□□□ 0.58
SNX11-212ENST00000583320 SYCE1Q8N0S2 351 aa18.65■□□□□ 0.58
SNX11-212ENST00000583320 CHCHD4Q8N4Q1 142 aa18.65■□□□□ 0.58
SNX11-212ENST00000583320 CCDC33Q8N5R6 958 aa18.65■□□□□ 0.58
SNX11-212ENST00000583320 TPCN2Q8NHX9 752 aa18.65■□□□□ 0.58
SNX11-212ENST00000583320 OSCP1Q8WVF1 389 aa18.65■□□□□ 0.58
SNX11-212ENST00000583320 COL26A1Q96A83 441 aa18.65■□□□□ 0.58
SNX11-212ENST00000583320 SLC32A1Q9H598 525 aa18.65■□□□□ 0.58
SNX11-212ENST00000583320 MRPL47Q9HD33 250 aaKnown RBP18.65■□□□□ 0.58
SNX11-212ENST00000583320 MBD1Q9UIS9 605 aaPredicted RBP18.65■□□□□ 0.58
SNX11-212ENST00000583320 MAGED2Q9UNF1 606 aaPredicted RBP18.65■□□□□ 0.58
SNX11-212ENST00000583320 CAPN6Q9Y6Q1 641 aa18.65■□□□□ 0.58
SNX11-212ENST00000583320 SCINQ9Y6U3 715 aa18.65■□□□□ 0.58
SNX11-212ENST00000583320 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 CTAGE9A4FU28 777 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 BUB1O43683 1085 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 CHRM1P11229 460 aaPredicted RBP18.64■□□□□ 0.57
SNX11-212ENST00000583320 OPRD1P41143 372 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 GABRB2P47870 512 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 BST2Q10589 180 aaKnown RBP18.64■□□□□ 0.57
SNX11-212ENST00000583320 LMAN2Q12907 356 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 SEMA3BQ13214 749 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 GAB4Q2WGN9 574 aa18.64■□□□□ 0.57
SNX11-212ENST00000583320 INTS6LQ5JSJ4 861 aaKnown RBP18.64■□□□□ 0.57
SNX11-212ENST00000583320 PLEKHA7Q6IQ23 1121 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms