RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 WFDC5Q8TCV5 224 aa16.87■□□□□ 0.29
SREBF1-221ENST00000583080 TMEM176AQ96HP8 235 aa16.87■□□□□ 0.29
SREBF1-221ENST00000583080 MTG2Q9H4K7 406 aa16.87■□□□□ 0.29
SREBF1-221ENST00000583080 TMEM8AQ9HCN3 771 aa16.87■□□□□ 0.29
SREBF1-221ENST00000583080 PRSS16Q9NQE7 514 aa16.87■□□□□ 0.29
SREBF1-221ENST00000583080 CISHQ9NSE2 258 aa16.87■□□□□ 0.29
SREBF1-221ENST00000583080 SFMBT1Q9UHJ3 866 aa16.87■□□□□ 0.29
SREBF1-221ENST00000583080 MAPK8IP1Q9UQF2 711 aa16.87■□□□□ 0.29
SREBF1-221ENST00000583080 PLXNA2O75051 1894 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 MSI1O43347 362 aaKnown RBP16.86■□□□□ 0.29
SREBF1-221ENST00000583080 TNFSF14O43557 240 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 TIMM44O43615 452 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 ZBED1O96006 694 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 KRT13P13646 458 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 GRK6P43250 576 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 DNM1Q05193 864 aaKnown RBP16.86■□□□□ 0.29
SREBF1-221ENST00000583080 PKP1Q13835 747 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 SUZ12Q15022 739 aaKnown RBP16.86■□□□□ 0.29
SREBF1-221ENST00000583080 E2F5Q15329 346 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 NFIL3Q16649 462 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 GOLGA7BQ2TAP0 167 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 ARHGAP17Q68EM7 881 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 DHRS13Q6UX07 377 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 GALNT15Q8N3T1 639 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.86■□□□□ 0.29
SREBF1-221ENST00000583080 CCDC150Q8NCX0 1101 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 WFIKKN2Q8TEU8 576 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 EDEM1Q92611 657 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 IGSF8Q969P0 613 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 UBXN6Q9BZV1 441 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 BTBD1Q9H0C5 482 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 OSGEPQ9NPF4 335 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 GGA2Q9UJY4 613 aa16.86■□□□□ 0.29
SREBF1-221ENST00000583080 A0A1B0GVL5 298 aa16.85■□□□□ 0.29
SREBF1-221ENST00000583080 PCDHGA12O60330 932 aa16.85■□□□□ 0.29
SREBF1-221ENST00000583080 PABPC1P11940 636 aaKnown RBP16.85■□□□□ 0.29
SREBF1-221ENST00000583080 CD27P26842 260 aa16.85■□□□□ 0.29
SREBF1-221ENST00000583080 CTSKP43235 329 aa16.85■□□□□ 0.29
SREBF1-221ENST00000583080 HARS2P49590 506 aaKnown RBP16.85■□□□□ 0.29
SREBF1-221ENST00000583080 CLDN6P56747 220 aa16.85■□□□□ 0.29
SREBF1-221ENST00000583080 PDE4CQ08493 712 aa16.85■□□□□ 0.29
SREBF1-221ENST00000583080 ADIGQ0VDE8 80 aa16.85■□□□□ 0.29
SREBF1-221ENST00000583080 SMAD1Q15797 465 aaKnown RBP16.85■□□□□ 0.29
SREBF1-221ENST00000583080 MBLAC2Q68D91 279 aa16.85■□□□□ 0.29
SREBF1-221ENST00000583080 KRT39Q6A163 491 aa16.85■□□□□ 0.29
SREBF1-221ENST00000583080 PM20D1Q6GTS8 502 aa16.85■□□□□ 0.29
SREBF1-221ENST00000583080 KIAA0907Q7Z7F0 614 aaPredicted RBP16.85■□□□□ 0.29
SREBF1-221ENST00000583080 ANKRD52Q8NB46 1076 aa16.85■□□□□ 0.29
SREBF1-221ENST00000583080 TATDN2Q93075 761 aa16.85■□□□□ 0.29
SREBF1-221ENST00000583080 DNAI2Q9GZS0 605 aa16.85■□□□□ 0.29
SREBF1-221ENST00000583080 STOML2Q9UJZ1 356 aa16.85■□□□□ 0.29
SREBF1-221ENST00000583080 ASXL3Q9C0F0 2248 aa16.84■□□□□ 0.29
SREBF1-221ENST00000583080 YJEFN3A6XGL0 299 aa16.84■□□□□ 0.29
SREBF1-221ENST00000583080 E7ENQ6 273 aa16.84■□□□□ 0.29
SREBF1-221ENST00000583080 DNTTP04053 509 aa16.84■□□□□ 0.29
SREBF1-221ENST00000583080 IGHV4-34P06331 123 aa16.84■□□□□ 0.29
SREBF1-221ENST00000583080 CD70P32970 193 aa16.84■□□□□ 0.29
SREBF1-221ENST00000583080 PSMC2P35998 433 aaKnown RBP16.84■□□□□ 0.29
SREBF1-221ENST00000583080 MXI1P50539 228 aa16.84■□□□□ 0.29
SREBF1-221ENST00000583080 AHI1Q8N157 1196 aa16.84■□□□□ 0.29
SREBF1-221ENST00000583080 EEF2KMTQ96G04 330 aa16.84■□□□□ 0.29
SREBF1-221ENST00000583080 SLC6A18Q96N87 628 aa16.84■□□□□ 0.29
SREBF1-221ENST00000583080 OLA1Q9NTK5 396 aaKnown RBP16.84■□□□□ 0.29
SREBF1-221ENST00000583080 FTSJ1Q9UET6 329 aa16.84■□□□□ 0.29
SREBF1-221ENST00000583080 SERGEFQ9UGK8 458 aa16.84■□□□□ 0.29
SREBF1-221ENST00000583080 RCOR1Q9UKL0 485 aa16.84■□□□□ 0.29
SREBF1-221ENST00000583080 TSPAN16Q9UKR8 245 aa16.84■□□□□ 0.29
SREBF1-221ENST00000583080 PLA2G4CQ9UP65 541 aa16.84■□□□□ 0.29
SREBF1-221ENST00000583080 HBS1LQ9Y450 684 aaKnown RBP16.84■□□□□ 0.29
SREBF1-221ENST00000583080 A0A087WV48 116 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 CBX4O00257 560 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 XPO1O14980 1071 aaKnown RBP16.83■□□□□ 0.28
SREBF1-221ENST00000583080 RHOBTB3O94955 611 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 DLDP09622 509 aaKnown RBP16.83■□□□□ 0.28
SREBF1-221ENST00000583080 BCAT1P54687 386 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 ENPEPQ07075 957 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 TTC31Q49AM3 519 aaPredicted RBP16.83■□□□□ 0.28
SREBF1-221ENST00000583080 ZCWPW2Q504Y3 356 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 PRAMEF14Q5SWL7 426 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 ADGRF1Q5T601 910 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 BSPRYQ5W0U4 402 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 ZNF776Q68DI1 518 aaPredicted RBP16.83■□□□□ 0.28
SREBF1-221ENST00000583080 RFWD3Q6PCD5 774 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 ADAT2Q7Z6V5 191 aaKnown RBP16.83■□□□□ 0.28
SREBF1-221ENST00000583080 GATAD2AQ86YP4 633 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 SCUBE3Q8IX30 993 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 FBXL13Q8NEE6 735 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 TMA16Q96EY4 203 aaKnown RBP16.83■□□□□ 0.28
SREBF1-221ENST00000583080 MYO19Q96H55 970 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 DCBLD2Q96PD2 775 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 FBRSQ9HAH7 460 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 SGK2Q9HBY8 427 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 HPSEQ9Y251 543 aa16.83■□□□□ 0.28
SREBF1-221ENST00000583080 COL5A1P20908 1838 aaPredicted RBP16.82■□□□□ 0.28
SREBF1-221ENST00000583080 GOLGA6L7A0A1B0GV03 622 aa16.82■□□□□ 0.28
SREBF1-221ENST00000583080 FAM47DPA6NHR8 397 aa16.82■□□□□ 0.28
SREBF1-221ENST00000583080 PLK4O00444 970 aa16.82■□□□□ 0.28
SREBF1-221ENST00000583080 ZIC2O95409 532 aaPredicted RBP16.82■□□□□ 0.28
SREBF1-221ENST00000583080 MYL1P05976 194 aa16.82■□□□□ 0.28
SREBF1-221ENST00000583080 SLC6A4P31645 630 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms