RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	PIK3AP1	Q6ZUJ8	805 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	ZNF765	Q7L2R6	523 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	CDR2L	Q86X02	465 aa	Predicted RBP	5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	CISD2	Q8N5K1	135 aa	Known RBP	5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	RBBP8NL	Q8NC74	664 aa	Predicted RBP	5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	RHPN1	Q8TCX5	695 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	TCP11	Q8WWU5	503 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	ESR2	Q92731	530 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	MTFMT	Q96DP5	389 aa	Known RBP	5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	ZMYND19	Q96E35	227 aa	Predicted RBP	5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	TAAR9	Q96RI9	348 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	TRIM55	Q9BYV6	548 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	ADAM19	Q9H013	955 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	ZNF395	Q9H8N7	513 aa	Predicted RBP	5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	AGPAT4	Q9NRZ5	378 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	SUCO	Q9UBS9	1254 aa	Known RBP	5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	LRWD1	Q9UFC0	647 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	TCEAL9	Q9UHQ7	104 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	ZNHIT2	Q9UHR6	403 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	FBXO10	Q9UK96	956 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	RCAN3	Q9UKA8	241 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	SCML1	Q9UN30	329 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	SLC27A6	Q9Y2P4	619 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772	SNX14	Q9Y5W7	946 aa		5.28	□□□□□ -1.56
MSI2-216	ENST00000582772		A0A1W2PQM1	296 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	TMEM150B	A6NC51	233 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	LRRC72	A6NJI9	287 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	FAM86B1	E9PN63	330 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	AGRP	O00253	132 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	DNTT	P04053	509 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	FURIN	P09958	794 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	FAM86B2	P0C5J1	330 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	TYMP	P19971	482 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	PRKCH	P24723	683 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	DNASE1	P24855	282 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	MARCKS	P29966	332 aa	Predicted RBP	5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	SFN	P31947	248 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	HCFC1	P51610	2035 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	CDH8	P55286	799 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	RPS14	P62263	151 aa	Known RBP	5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	PTK2B	Q14289	1009 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	DRAP1	Q14919	205 aa	Predicted RBP	5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	DUS1L	Q6P1R4	473 aa	Known RBP	5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	C16orf46	Q6P387	395 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	ANO5	Q75V66	913 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	KCNMB4	Q86W47	210 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	SLITRK4	Q8IW52	837 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	RHOT1	Q8IXI2	618 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	NLGN4X	Q8N0W4	816 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	ZNF548	Q8NEK5	533 aa	Predicted RBP	5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	RDM1	Q8NG50	284 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	CRYGN	Q8WXF5	182 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	GOLGA1	Q92805	767 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	AGAP3	Q96P47	875 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	XPO6	Q96QU8	1125 aa	Known RBP	5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	ZKSCAN3	Q9BRR0	538 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	ZNF577	Q9BSK1	485 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	ZCWPW1	Q9H0M4	648 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	PDZD7	Q9H5P4	517 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	CNNM2	Q9H8M5	875 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	IL1RAPL2	Q9NP60	686 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	TMEM63C	Q9P1W3	806 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	RCOR3	Q9P2K3	495 aa	Predicted RBP	5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	USP25	Q9UHP3	1055 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	FZD4	Q9ULV1	537 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	EDAR	Q9UNE0	448 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	DMTF1	Q9Y222	760 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	NTNG1	Q9Y2I2	539 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	SAMM50	Q9Y512	469 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	PCDHB3	Q9Y5E6	796 aa		5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	COPG1	Q9Y678	874 aa	Known RBP	5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	MDC1	Q14676	2089 aa	Known RBP	5.27	□□□□□ -1.57
MSI2-216	ENST00000582772	SACS	Q9NZJ4	4579 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	SLC12A8	A0AV02	714 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	HGS	O14964	777 aa	Predicted RBP	5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	MUSK	O15146	869 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	MSH4	O15457	936 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	NEBL	O76041	1014 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	NOS2	P35228	1153 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	RFC5	P40937	340 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	DGKG	P49619	791 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	JAK3	P52333	1124 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	HNRNPK	P61978	463 aa	Known RBP eCLIP	5.26	□□□□□ -1.57	2e-6	■■■■□ 21.3
MSI2-216	ENST00000582772	ZNF234	Q14588	700 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	EIF4H	Q15056	248 aa	Known RBP	5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	ASIC2	Q16515	512 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	UBE2S	Q16763	222 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	FAM187B	Q17R55	369 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	EFHC2	Q5JST6	749 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	OVOS1	Q6IE37	1185 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	ARMCX5	Q6P1M9	558 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	MEX3B	Q6ZN04	569 aa	Known RBP	5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	USP37	Q86T82	979 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	TMEM200A	Q86VY9	491 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	PLA2G4D	Q86XP0	818 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	TMEM25	Q86YD3	366 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	SLC35F3	Q8IY50	421 aa		5.26	□□□□□ -1.57
MSI2-216	ENST00000582772	PPM1N	Q8N819	430 aa		5.26	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms