RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	ENGASE	Q8NFI3	743 aa		12.12	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	OR2T3	Q8NH03	318 aa		12.12	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	ZCCHC14	Q8WYQ9	949 aa	Known RBP	12.12	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	KCTD13	Q8WZ19	329 aa		12.12	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	DNASE2B	Q8WZ79	361 aa		12.12	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	NT5C1B	Q96P26	610 aa		12.12	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	NUP58	Q9BVL2	599 aa		12.12	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	MIS12	Q9H081	205 aa		12.12	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	CNGB3	Q9NQW8	809 aa		12.12	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	ABCC13	Q9NSE7	274 aa		12.12	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	STIM2	Q9P246	746 aa		12.12	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	GGA2	Q9UJY4	613 aa		12.12	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	NEUROG3	Q9Y4Z2	214 aa		12.12	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	PCDHB9	Q9Y5E1	797 aa		12.12	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	SLCO1B1	Q9Y6L6	691 aa		12.12	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	METTL12	A8MUP2	240 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	PSMA7	O14818	248 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	BCAT2	O15382	392 aa	Predicted RBP	12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	TIMM44	O43615	452 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	PABPC1	P11940	636 aa	Known RBP	12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	OXTR	P30559	389 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	SLC6A4	P31645	630 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	CD70	P32970	193 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	ACSL1	P33121	698 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	ZNF132	P52740	706 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	STIM1	Q13586	685 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	TRIP6	Q15654	476 aa	Known RBP	12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	MBLAC2	Q68D91	279 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	LCLAT1	Q6UWP7	414 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	LAYN	Q6UX15	382 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	ADIPOR2	Q86V24	386 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	ARHGEF19	Q8IW93	802 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	CADM4	Q8NFZ8	388 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	SPATA20	Q8TB22	786 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	SETD7	Q8WTS6	366 aa	Known RBP	12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	SLC35F5	Q8WV83	523 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	MYEOV	Q96EZ4	313 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	LHX5	Q9H2C1	402 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	TMEM245	Q9H330	911 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	MTG2	Q9H4K7	406 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	C6orf106	Q9H6K1	298 aa	Predicted RBP	12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	GAREM1	Q9H706	876 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	MAN1B1	Q9UKM7	699 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	PLA2G4C	Q9UP65	541 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	NUMA1	Q14980	2115 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	IGF2R	P11717	2491 aa		12.11	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	MUC22	E2RYF6	1773 aa	Predicted RBP	12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114		A0A1B0GVT2	93 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	BIN1	O00499	593 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	LTF	P02788	710 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	PAEP	P09466	180 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	RDX	P35241	583 aa	Known RBP	12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	CSNK1E	P49674	416 aa	Known RBP	12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	NUMB	P49757	651 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	TBX4	P57082	545 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	BNC1	Q01954	994 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	CAMK2G	Q13555	558 aa	Predicted RBP	12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	PTPRN	Q16849	979 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	FAM133B	Q5BKY9	247 aa	Known RBP	12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	MSANTD2	Q6P1R3	559 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	AHI1	Q8N157	1196 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	ADAM32	Q8TC27	787 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	WFIKKN2	Q8TEU8	576 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	NELFB	Q8WX92	580 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	METTL14	Q9HCE5	456 aa	Known RBP	12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	STOML2	Q9UJZ1	356 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	KIAA1257	Q9ULG3	409 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	CTNND2	Q9UQB3	1225 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	FNDC3A	Q9Y2H6	1198 aa	Known RBP	12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	MSRB2	Q9Y3D2	182 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	ZZEF1	O43149	2961 aa		12.1	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	TMEM8B	A6NDV4	472 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	GOLGA8CP	A6NN73	597 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	SRRM3	A6NNA2	597 aa	Predicted RBP	12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	ACSL4	O60488	711 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	LATS1	O95835	1130 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	MOCS2	O96007	188 aa	Predicted RBP	12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	IGLV3-19	P01714	112 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	IGLV3-27	P01718	113 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	FTH1P19	P0C7X4	201 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	POLR2E	P19388	210 aa	Known RBP	12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	MATK	P42679	507 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	SLC11A2	P49281	568 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	STX17	P56962	302 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	ZNF445	P59923	1031 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	RPS14	P62263	151 aa	Known RBP	12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	SLC14A1	Q13336	389 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	E2F5	Q15329	346 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	CNGA2	Q16280	664 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	ZNF423	Q2M1K9	1284 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	HLA-B	Q31612	363 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	PIK3R6	Q5UE93	754 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	NADSYN1	Q6IA69	706 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	TTI2	Q6NXR4	508 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	RAB44	Q7Z6P3	723 aa	Predicted RBP	12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	MFN1	Q8IWA4	741 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	UNC45B	Q8IWX7	931 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	CARNMT1	Q8N4J0	409 aa		12.09	□□□□□ -0.47
CDK5RAP3-223	ENST00000582114	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	12.09	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms