RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 HACD1B0YJ81 288 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 FAM72CH0Y354 149 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 RTN3O95197 1032 aaPredicted RBP15.11■□□□□ 0.01
MKS1-211ENST00000581761 TTC4O95801 387 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 IGLV3-25P01717 112 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 DNAJB2P25686 324 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 ZNF135P52742 658 aaPredicted RBP15.11■□□□□ 0.01
MKS1-211ENST00000581761 NRLP54845 237 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 SEMA3BQ13214 749 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 PAFAH1B3Q15102 231 aaKnown RBP15.11■□□□□ 0.01
MKS1-211ENST00000581761 KYNUQ16719 465 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 USP41Q3LFD5 358 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 MGAT5BQ3V5L5 792 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 FAM72AQ5TYM5 149 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 FAM72DQ6L9T8 149 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 FAM117BQ6P1L5 589 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 RNF19BQ6ZMZ0 732 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 CENPUQ71F23 418 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 PDZD4Q76G19 769 aaPredicted RBP15.11■□□□□ 0.01
MKS1-211ENST00000581761 MON1AQ86VX9 555 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 FAM72BQ86X60 149 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 RELL1Q8IUW5 271 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 HERC6Q8IVU3 1022 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 TTC9BQ8N6N2 239 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 NAT8LQ8N9F0 302 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 C2orf15Q8WU43 125 aaKnown RBP15.11■□□□□ 0.01
MKS1-211ENST00000581761 LRRN4Q8WUT4 740 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 TFB1MQ8WVM0 346 aaKnown RBP15.11■□□□□ 0.01
MKS1-211ENST00000581761 EXOC4Q96A65 974 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 IGSF21Q96ID5 467 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 PKNOX2Q96KN3 472 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 GUCD1Q96NT3 240 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 OLFM3Q96PB7 478 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 SMOC2Q9H3U7 446 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 GMIPQ9P107 970 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 SLC27A5Q9Y2P5 690 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 MYO16Q9Y6X6 1858 aa15.11■□□□□ 0.01
MKS1-211ENST00000581761 CHD7Q9P2D1 2997 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 TLDC2A0PJX2 215 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 SMIM23A6NLE4 172 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 GOLGA8MH3BSY2 632 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 I6L893 689 aaPredicted RBP15.1■□□□□ 0.01
MKS1-211ENST00000581761 DCLK1O15075 740 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 SOAT2O75908 522 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 ARHGEF15O94989 841 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 VNN2O95498 520 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 HAPLN1P10915 354 aaPredicted RBP15.1■□□□□ 0.01
MKS1-211ENST00000581761 ERCC2P18074 760 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 YWHAQP27348 245 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 HCAR3P49019 387 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 PGFP49763 221 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 ARL4CP56559 192 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 USP46P62068 366 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 PDK1Q15118 436 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 PSMD5Q16401 504 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 SKIDA1Q1XH10 827 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 BRMS1LQ5PSV4 323 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 C4orf22Q6V702 233 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 DENND5BQ6ZUT9 1274 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 FBXO22Q8NEZ5 403 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 PHOSPHO2Q8TCD6 241 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 GPR152Q8TDT2 470 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 CASP10Q92851 521 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 FBXO32Q969P5 355 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 TOP1MTQ969P6 601 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 C9orf72Q96LT7 481 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 TMEM109Q9BVC6 243 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 TTYH1Q9H313 450 aaPredicted RBP15.1■□□□□ 0.01
MKS1-211ENST00000581761 LRRC4CQ9HCJ2 640 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 COMMD8Q9NX08 183 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 ARHGEF38Q9NXL2 777 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 MTRRQ9UBK8 725 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 SFMBT1Q9UHJ3 866 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 XPO7Q9UIA9 1087 aaKnown RBP15.1■□□□□ 0.01
MKS1-211ENST00000581761 CDY1Q9Y6F8 540 aa15.1■□□□□ 0.01
MKS1-211ENST00000581761 PTPRSQ13332 1948 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 TCRBV7S3A2A0A539 114 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 PPP1R12AO14974 1030 aaPredicted RBP15.09■□□□□ 0.01
MKS1-211ENST00000581761 CHADO15335 359 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 EIF3HO15372 352 aaKnown RBP eCLIP15.09■□□□□ 0.01
MKS1-211ENST00000581761 MSI1O43347 362 aaKnown RBP15.09■□□□□ 0.01
MKS1-211ENST00000581761 EFCAB14O75071 495 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 GCATO75600 419 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 TMEM63AO94886 807 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 VAV1P15498 845 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 RPL10AP62906 217 aaKnown RBP15.09■□□□□ 0.01
MKS1-211ENST00000581761 PDIA2Q13087 525 aaKnown RBP15.09■□□□□ 0.01
MKS1-211ENST00000581761 KCNJ11Q14654 390 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 HIF1AQ16665 826 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 C6orf118Q5T5N4 469 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 HEATR6Q6AI08 1181 aaKnown RBP15.09■□□□□ 0.01
MKS1-211ENST00000581761 KIAA1841Q6NSI8 718 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 MSANTD2Q6P1R3 559 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 CCDC110Q8TBZ0 833 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 EPS8L3Q8TE67 593 aaKnown RBP15.09■□□□□ 0.01
MKS1-211ENST00000581761 HTR3CQ8WXA8 447 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 SPATA17Q96L03 361 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 TTC25Q96NG3 672 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 ZNF558Q96NG5 402 aa15.09■□□□□ 0.01
MKS1-211ENST00000581761 SERPINB11Q96P15 392 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms