RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 TBL1XO60907 577 aa20.24■□□□□ 0.83
SREBF1-220ENST00000581707 GRAP2O75791 330 aa20.24■□□□□ 0.83
SREBF1-220ENST00000581707 IGLV3-25P01717 112 aa20.24■□□□□ 0.83
SREBF1-220ENST00000581707 APOEP02649 317 aa20.24■□□□□ 0.83
SREBF1-220ENST00000581707 BCKDHBP21953 392 aa20.24■□□□□ 0.83
SREBF1-220ENST00000581707 HLA-FP30511 346 aa20.24■□□□□ 0.83
SREBF1-220ENST00000581707 POLR2FP61218 127 aaKnown RBP20.24■□□□□ 0.83
SREBF1-220ENST00000581707 PITX1P78337 314 aaPredicted RBP20.24■□□□□ 0.83
SREBF1-220ENST00000581707 ARHGAP8P85298 464 aa20.24■□□□□ 0.83
SREBF1-220ENST00000581707 SLC6A3Q01959 620 aa20.24■□□□□ 0.83
SREBF1-220ENST00000581707 NCAPHQ15003 741 aa20.24■□□□□ 0.83
SREBF1-220ENST00000581707 TAF3Q5VWG9 929 aa20.24■□□□□ 0.83
SREBF1-220ENST00000581707 TMEM215Q68D42 235 aa20.24■□□□□ 0.83
SREBF1-220ENST00000581707 OLFML1Q6UWY5 402 aa20.24■□□□□ 0.83
SREBF1-220ENST00000581707 PRR23CQ6ZRP0 262 aa20.24■□□□□ 0.83
SREBF1-220ENST00000581707 DDX1Q92499 740 aaKnown RBP20.24■□□□□ 0.83
SREBF1-220ENST00000581707 NAT10Q9H0A0 1025 aaKnown RBP20.24■□□□□ 0.83
SREBF1-220ENST00000581707 CD248Q9HCU0 757 aa20.24■□□□□ 0.83
SREBF1-220ENST00000581707 ABCB8Q9NUT2 735 aa20.24■□□□□ 0.83
SREBF1-220ENST00000581707 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.24■□□□□ 0.83
SREBF1-220ENST00000581707 LRRC10BA6NIK2 292 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 LGALS16A8MUM7 142 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 MAP3K13O43283 966 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 FOXD2O60548 495 aaPredicted RBP20.23■□□□□ 0.83
SREBF1-220ENST00000581707 ZNF18P17022 549 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 CDH5P33151 784 aaPredicted RBP20.23■□□□□ 0.83
SREBF1-220ENST00000581707 IL12RB1P42701 662 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 ARID5AQ03989 594 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 ZNF234Q14588 700 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 SYCP1Q15431 976 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 CCDC6Q16204 474 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 RSPO4Q2I0M5 234 aaPredicted RBP20.23■□□□□ 0.83
SREBF1-220ENST00000581707 MAP7D1Q3KQU3 841 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 PMS2CLQ68D20 193 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 RNF43Q68DV7 783 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 SLC26A9Q7LBE3 791 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 NOP9Q86U38 636 aaKnown RBP20.23■□□□□ 0.83
SREBF1-220ENST00000581707 ZDHHC17Q8IUH5 632 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 HJURPQ8NCD3 748 aaPredicted RBP20.23■□□□□ 0.83
SREBF1-220ENST00000581707 WFIKKN2Q8TEU8 576 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 SORCS1Q8WY21 1168 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 BTN2A3PQ96KV6 586 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 NUCKS1Q9H1E3 243 aaKnown RBP20.23■□□□□ 0.83
SREBF1-220ENST00000581707 FAM204AQ9H8W3 233 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.23■□□□□ 0.83
SREBF1-220ENST00000581707 DDIT4Q9NX09 232 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 CALCOCO1Q9P1Z2 691 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 STIM2Q9P246 746 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 SLC12A6Q9UHW9 1150 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 SIK3Q9Y2K2 1263 aa20.23■□□□□ 0.83
SREBF1-220ENST00000581707 PLXND1Q9Y4D7 1925 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 TYW5A2RUC4 315 aaKnown RBP20.22■□□□□ 0.83
SREBF1-220ENST00000581707 GFPT2O94808 682 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 ZNF806P0C7X5 589 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 SLC2A3P11169 496 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 NDUFV2P19404 249 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 SDHBP21912 280 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 RPS24P62847 133 aaKnown RBP20.22■□□□□ 0.83
SREBF1-220ENST00000581707 CREB5Q02930 508 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 UBXN1Q04323 297 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 EIF4EBP2Q13542 120 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-220ENST00000581707 ENPP2Q13822 863 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 STARD3Q14849 445 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 MS4A13Q5J8X5 152 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 CAVIN1Q6NZI2 390 aaKnown RBP20.22■□□□□ 0.83
SREBF1-220ENST00000581707 CHST9Q7L1S5 443 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 KIAA0907Q7Z7F0 614 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-220ENST00000581707 ERICH1Q86X53 443 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 AOPEPQ8N6M6 819 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 FRMD1Q8N878 549 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.22■□□□□ 0.83
SREBF1-220ENST00000581707 ATP6V0D2Q8N8Y2 350 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 ZNF557Q8N988 423 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-220ENST00000581707 ZNF397Q8NF99 534 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-220ENST00000581707 EPS8L1Q8TE68 723 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 MYEOVQ96EZ4 313 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 PCMTD1Q96MG8 357 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-220ENST00000581707 PRICKLE1Q96MT3 831 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-220ENST00000581707 HSD3B7Q9H2F3 369 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 NLRC4Q9NPP4 1024 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 XPO7Q9UIA9 1087 aaKnown RBP20.22■□□□□ 0.83
SREBF1-220ENST00000581707 MBD1Q9UIS9 605 aaPredicted RBP20.22■□□□□ 0.83
SREBF1-220ENST00000581707 GGA2Q9UJY4 613 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 DAAM1Q9Y4D1 1078 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 NUP205Q92621 2012 aa20.22■□□□□ 0.83
SREBF1-220ENST00000581707 SYNJ2BP-COX16A0A087WUM0 186 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 BCLAF3A2AJT9 711 aaKnown RBP20.21■□□□□ 0.83
SREBF1-220ENST00000581707 EPHB6O15197 1021 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 DAB1O75553 588 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 LSM8O95777 96 aaKnown RBP20.21■□□□□ 0.83
SREBF1-220ENST00000581707 MMEP08473 750 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 PABPC1P11940 636 aaKnown RBP20.21■□□□□ 0.83
SREBF1-220ENST00000581707 MPLP40238 635 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 GABRB2P47870 512 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 JAM2P57087 298 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 PUM1Q14671 1186 aaKnown RBP eCLIP20.21■□□□□ 0.83
SREBF1-220ENST00000581707 ANO6Q4KMQ2 910 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 PLA2G2CQ5R387 149 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 LPCAT2Q7L5N7 544 aa20.21■□□□□ 0.83
SREBF1-220ENST00000581707 ADIPOR2Q86V24 386 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms