RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 COLEC12Q5KU26 742 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 KIAA1614Q5VZ46 1190 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 RRAGBQ5VZM2 374 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 NCEH1Q6PIU2 408 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 CHST9Q7L1S5 443 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 SCD5Q86SK9 330 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 TADA2BQ86TJ2 420 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 CPXM2Q8N436 756 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 C12orf29Q8N999 325 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 FBXL12Q9NXK8 326 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 CCDC39Q9UFE4 941 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 HMGXB4Q9UGU5 601 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 PCDHA5Q9Y5H7 936 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 H3BQV1 296 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 BMP15O95972 392 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 RALAP11233 206 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 HLA-FP30511 346 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 RXRGP48443 463 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 NDST1P52848 882 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 NXPH1P58417 271 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 E2F1Q01094 437 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 CYP24A1Q07973 514 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 EFEMP1Q12805 493 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 KCNJ12Q14500 433 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 PROX2Q3B8N5 592 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 CLEC20AQ6ZU45 233 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 USP30Q70CQ3 517 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 KANSL1Q7Z3B3 1105 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 LSMEM2Q8N112 164 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 WFIKKN2Q8TEU8 576 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 GOLGA1Q92805 767 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 GZF1Q9H116 711 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 PABPC3Q9H361 631 aaKnown RBP13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 MTG2Q9H4K7 406 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 VRTNQ9H8Y1 702 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 SERGEFQ9UGK8 458 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 HEMK1Q9Y5R4 338 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 FLNCQ14315 2725 aa13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 SPTAN1Q13813 2472 aaKnown RBP13.15□□□□□ -0.3
CSNK1D-218ENST00000581655 TLN1Q9Y490 2541 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 TLR4O00206 839 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 DXOO77932 396 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 HOXD9P28356 352 aaPredicted RBP13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 HOXD13P35453 343 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 PSEN1P49768 467 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 ERVPABLB-1P60509 514 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 NFATC3Q12968 1075 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 BIRC3Q13489 604 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 MPPE1Q53F39 396 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 STXBP4Q6ZWJ1 553 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 ADIPOR2Q86V24 386 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 ZC3H3Q8IXZ2 948 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 CRYBG2Q8N1P7 616 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 ZNF276Q8N554 614 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 OXR1Q8N573 874 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 HPS3Q969F9 1004 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 DPH1Q9BZG8 443 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 FAM117AQ9C073 453 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 NEUROG2Q9H2A3 272 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 ERVMER34-1Q9H9K5 563 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 ABCB8Q9NUT2 735 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 SUN2Q9UH99 717 aa13.14□□□□□ -0.31
CSNK1D-218ENST00000581655 TDRD6O60522 2096 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 A0A1W2PP55 124 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 SLC12A8A0AV02 714 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 LRRC72A6NJI9 287 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 K7ENP7 123 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 CLIC2O15247 247 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 SIGLEC6O43699 453 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 SDC3O75056 442 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 USP12O75317 370 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 NTRK1P04629 796 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 DLDP09622 509 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 CASP4P49662 377 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 CYP2J2P51589 502 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 KIF11P52732 1056 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 DAB2P98082 770 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 PDE4CQ08493 712 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 BMT2Q1RMZ1 405 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 SLC45A4Q5BKX6 768 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 MBLAC2Q68D91 279 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 INO80CQ6PI98 192 aaPredicted RBP13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 CCDC186Q7Z3E2 898 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 SPATS2Q86XZ4 545 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 FAM217AQ8IXS0 508 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 CCDC65Q8IXS2 484 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 OR2T34Q8NGX1 318 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 VCPIP1Q96JH7 1222 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 SERAC1Q96JX3 654 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 CDK5RAP1Q96SZ6 601 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 RSPH9Q9H1X1 276 aaPredicted RBP13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 POLR1BQ9H9Y6 1135 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 ASCL3Q9NQ33 180 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 AGPAT3Q9NRZ7 376 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 CLIC5Q9NZA1 410 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 MARCH2Q9P0N8 246 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 GGA2Q9UJY4 613 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 SCML1Q9UN30 329 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 LRRK2Q5S007 2527 aa13.13□□□□□ -0.31
CSNK1D-218ENST00000581655 DOCK9Q9BZ29 2069 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms