RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ODF2LQ9ULJ1 636 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 KIF26BQ2KJY2 2108 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 DOCK9Q9BZ29 2069 aa8.09□□□□□ -1.11
SMARCE1-217ENST00000580654 NYNRINQ9P2P1 1898 aaKnown RBP8.09□□□□□ -1.12
SMARCE1-217ENST00000580654 MDM4O15151 490 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 SIGLEC6O43699 453 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 OPA1O60313 960 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 TLR5O60602 858 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 KLKB1P03952 638 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 FAM87AP0C7U9 286 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 PTPN1P18031 435 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 SCP2P22307 547 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 LORP23490 312 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 CD38P28907 300 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 SLC5A3P53794 718 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 TRIM29Q14134 588 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 TMEM119Q4V9L6 283 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 SERPINA13PQ6UXR4 307 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 PAQR9Q6ZVX9 377 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 ANKS1BQ7Z6G8 1248 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 ZSCAN1Q8NBB4 408 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 CACTINQ8WUQ7 758 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 UCMAQ8WVF2 138 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 POMGNT1Q8WZA1 660 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 EXTL1Q92935 676 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 GTF3C6Q969F1 213 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 SAAL1Q96ER3 474 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 SLC46A1Q96NT5 459 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 FAM213AQ9BRX8 229 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 ELOVL4Q9GZR5 314 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 CAAP1Q9H8G2 361 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 SGK2Q9HBY8 427 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.08□□□□□ -1.122e-6■■■■■ 149.1
SMARCE1-217ENST00000580654 GDF3Q9NR23 364 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 SERGEFQ9UGK8 458 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 SEPT3Q9UH03 358 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 SATB2Q9UPW6 733 aa8.08□□□□□ -1.12
SMARCE1-217ENST00000580654 A0A1B0GVM2 712 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 BLACEA4D250 179 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 CDRT15L2A8MXV6 281 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 TLR4O00206 839 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 LZTS3O60299 673 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 SDC3O75056 442 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 GIMD1P0DJR0 217 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 GNL1P36915 607 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 ARRB1P49407 418 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 GALCP54803 685 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 ASIC1P78348 528 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 KCNA1Q09470 495 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 SRSF6Q13247 344 aaKnown RBP8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 EIF4HQ15056 248 aaKnown RBP8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 C3orf38Q5JPI3 329 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 XKR5Q6UX68 686 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 SLC25A45Q8N413 288 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 ZMIZ2Q8NF64 920 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 OR5B17Q8NGF7 314 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 HPDLQ96IR7 371 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 DEPDC7Q96QD5 511 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 SEMA3CQ99985 751 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 RAB34Q9BZG1 259 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 CIPCQ9C0C6 399 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 NACA2Q9H009 215 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 GZF1Q9H116 711 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 FOXP1Q9H334 677 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 ST6GALNAC4Q9H4F1 302 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 ERVMER34-1Q9H9K5 563 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 PARVGQ9HBI0 331 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 PDE11AQ9HCR9 933 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 CYLDQ9NQC7 956 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 PRSS16Q9NQE7 514 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 AASDHPPTQ9NRN7 309 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 RBAKQ9NYW8 714 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 LSM7Q9UK45 103 aaKnown RBP8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 NUDT5Q9UKK9 219 aa8.07□□□□□ -1.12
SMARCE1-217ENST00000580654 TDRD6O60522 2096 aaKnown RBP8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 LY6G6EA0A0G2JKS1 128 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 GOLGA8IPA6NC78 632 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 FAM47DPA6NHR8 397 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 GOLGA8JA6NMD2 632 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 STC2O76061 302 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 BEST1O76090 585 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 FAM13AO94988 1023 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 DNTTP04053 509 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 PRPHP41219 470 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 TRAPPC10P48553 1259 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 ZBTB16Q05516 673 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 ZNF211Q13398 564 aaPredicted RBP8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 IGFBP7Q16270 282 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 ISXQ2M1V0 245 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 ZSCAN23Q3MJ62 389 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 NCEH1Q6PIU2 408 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 FAM35AQ86V20 835 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 GPBP1Q86WP2 473 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 ZC3H3Q8IXZ2 948 aaKnown RBP8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 B3GALNT2Q8NCR0 500 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 OR6B3Q8NGW1 331 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 CYB5D2Q8WUJ1 264 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 SKA1Q96BD8 255 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 CCNL2Q96S94 520 aaPredicted RBP8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 STRA6Q9BX79 667 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms