RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 ABCB4P21439 1286 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 SLC6A4P31645 630 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 CCR1P32246 355 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 CDH5P33151 784 aaPredicted RBP11.31□□□□□ -0.6
NDEL1-208ENST00000580237 SULT1E1P49888 294 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 JAM2P57087 298 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 RNASE9P60153 205 aaKnown RBP11.31□□□□□ -0.6
NDEL1-208ENST00000580237 NOMO3P69849 1222 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 CDR2Q01850 454 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 SLC6A3Q01959 620 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 GEN1Q17RS7 908 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 USP39Q53GS9 565 aaKnown RBP11.31□□□□□ -0.6
NDEL1-208ENST00000580237 FAM133BQ5BKY9 247 aaKnown RBP11.31□□□□□ -0.6
NDEL1-208ENST00000580237 ZC3H12AQ5D1E8 599 aaKnown RBP11.31□□□□□ -0.6
NDEL1-208ENST00000580237 TMEM92Q6UXU6 159 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 TRIM72Q6ZMU5 477 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 SND1Q7KZF4 910 aaKnown RBP eCLIP11.31□□□□□ -0.6
NDEL1-208ENST00000580237 MFN1Q8IWA4 741 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 KIAA2013Q8IYS2 634 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 DCLK2Q8N568 766 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 WFIKKN2Q8TEU8 576 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 C18orf8Q96DM3 657 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 BTN2A3PQ96KV6 586 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 SLC2A13Q96QE2 648 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 NUCKS1Q9H1E3 243 aaKnown RBP11.31□□□□□ -0.6
NDEL1-208ENST00000580237 HSD3B7Q9H2F3 369 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 CACNA2D2Q9NY47 1150 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 EBF1Q9UH73 591 aa11.31□□□□□ -0.6
NDEL1-208ENST00000580237 NOCTQ9UK39 431 aaKnown RBP11.31□□□□□ -0.6
NDEL1-208ENST00000580237 VPS13AQ96RL7 3174 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 M0QYT0 321 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 ADAM23O75077 832 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 CISD3P0C7P0 127 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 PABPC1P11940 636 aaKnown RBP11.3□□□□□ -0.6
NDEL1-208ENST00000580237 NSFP46459 744 aaKnown RBP11.3□□□□□ -0.6
NDEL1-208ENST00000580237 SGSHP51688 502 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 PITX1P78337 314 aaPredicted RBP11.3□□□□□ -0.6
NDEL1-208ENST00000580237 SKOR2Q2VWA4 1001 aaPredicted RBP11.3□□□□□ -0.6
NDEL1-208ENST00000580237 FNDC3BQ53EP0 1204 aaKnown RBP11.3□□□□□ -0.6
NDEL1-208ENST00000580237 C2CD6Q53TS8 623 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 PIK3R6Q5UE93 754 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 RAP1GAP2Q684P5 730 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 NADSYN1Q6IA69 706 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 SERPINA13PQ6UXR4 307 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 MMS22LQ6ZRQ5 1243 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 CHST9Q7L1S5 443 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 C11orf74Q86VG3 221 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 RASSF3Q86WH2 238 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 LGI2Q8N0V4 545 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 AHI1Q8N157 1196 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 CARNMT1Q8N4J0 409 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 FAM160A2Q8N612 972 aaPredicted RBP11.3□□□□□ -0.6
NDEL1-208ENST00000580237 CPA5Q8WXQ8 436 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 DDX1Q92499 740 aaKnown RBP11.3□□□□□ -0.6
NDEL1-208ENST00000580237 AZIN2Q96A70 460 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 SLC39A13Q96H72 371 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 PRICKLE1Q96MT3 831 aaPredicted RBP11.3□□□□□ -0.6
NDEL1-208ENST00000580237 ACOX2Q99424 681 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 C11orf70Q9BRQ4 267 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 IRX2Q9BZI1 471 aaPredicted RBP11.3□□□□□ -0.6
NDEL1-208ENST00000580237 ABCB8Q9NUT2 735 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.3□□□□□ -0.6
NDEL1-208ENST00000580237 RRN3Q9NYV6 651 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.3□□□□□ -0.6
NDEL1-208ENST00000580237 GGA2Q9UJY4 613 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 INVSQ9Y283 1065 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 STARD13Q9Y3M8 1113 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 PAXBP1Q9Y5B6 917 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 RAD54BQ9Y620 910 aa11.3□□□□□ -0.6
NDEL1-208ENST00000580237 DOCK4Q8N1I0 1966 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 H0Y626 953 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 GFRA2O00451 464 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 NPC1O15118 1278 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 MAP3K13O43283 966 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 SYNCRIPO60506 623 aaKnown RBP11.29□□□□□ -0.6
NDEL1-208ENST00000580237 RHOBTB1O94844 696 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 IGLV3-25P01717 112 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 RETP07949 1114 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 HNRNPLP14866 589 aaKnown RBP eCLIP11.29□□□□□ -0.6
NDEL1-208ENST00000580237 FERP16591 822 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 TACR2P21452 398 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 HLA-FP30511 346 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 NOS2P35228 1153 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 SCNN1AP37088 669 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 MATKP42679 507 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 RPS24P62847 133 aaKnown RBP11.29□□□□□ -0.6
NDEL1-208ENST00000580237 FMO1Q01740 532 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 SPEM2Q0P670 501 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 MTA1Q13330 715 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 BYSLQ13895 437 aaKnown RBP11.29□□□□□ -0.6
NDEL1-208ENST00000580237 MS4A13Q5J8X5 152 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 RABGAP1LQ5R372 815 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 MPP7Q5T2T1 576 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 KIAA1324Q6UXG2 1013 aaKnown RBP11.29□□□□□ -0.6
NDEL1-208ENST00000580237 APTXQ7Z2E3 356 aaKnown RBP11.29□□□□□ -0.6
NDEL1-208ENST00000580237 LUZP1Q86V48 1076 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 KBTBD6Q86V97 674 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 XYLT1Q86Y38 959 aa11.29□□□□□ -0.6
NDEL1-208ENST00000580237 GPR161Q8N6U8 529 aaKnown RBP11.29□□□□□ -0.6
NDEL1-208ENST00000580237 ZNF397Q8NF99 534 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms