RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 GGA2Q9UJY4 613 aa14.28□□□□□ -0.12
GGA3-208ENST00000579743 CTNND2Q9UQB3 1225 aa14.28□□□□□ -0.12
GGA3-208ENST00000579743 GON4LQ3T8J9 2241 aa14.27□□□□□ -0.12
GGA3-208ENST00000579743 RNASEH1O60930 286 aaKnown RBP14.27□□□□□ -0.13
GGA3-208ENST00000579743 MOCS3O95396 460 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 PABPC1P11940 636 aaKnown RBP14.27□□□□□ -0.13
GGA3-208ENST00000579743 BRD2P25440 801 aaKnown RBP14.27□□□□□ -0.13
GGA3-208ENST00000579743 TPMTP51580 245 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 SNX16P57768 344 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 ZBTB16Q05516 673 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 SEMA3BQ13214 749 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 MORC3Q14149 939 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 TTC31Q49AM3 519 aaPredicted RBP14.27□□□□□ -0.13
GGA3-208ENST00000579743 PMF1Q6P1K2 205 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 IL27RAQ6UWB1 636 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 HJURPQ8NCD3 748 aaPredicted RBP14.27□□□□□ -0.13
GGA3-208ENST00000579743 OR2T3Q8NH03 318 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 TFAP2BQ92481 460 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 FAM149B1Q96BN6 582 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 MED15Q96RN5 788 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 SRRTQ9BXP5 876 aaKnown RBP14.27□□□□□ -0.13
GGA3-208ENST00000579743 MKRN2Q9H000 416 aaKnown RBP14.27□□□□□ -0.13
GGA3-208ENST00000579743 MIS12Q9H081 205 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 MIR1-1HGQ9H1L0 117 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 LHX5Q9H2C1 402 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 SLC12A6Q9UHW9 1150 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 PI4KAP42356 2102 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 CEP192Q8TEP8 1941 aa14.27□□□□□ -0.13
GGA3-208ENST00000579743 PPP1R3GB7ZBB8 358 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 BIN1O00499 593 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 MSI1O43347 362 aaKnown RBP14.26□□□□□ -0.13
GGA3-208ENST00000579743 ACSL4O60488 711 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 TBL1XO60907 577 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 APOEP02649 317 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 DNTTP04053 509 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 DLDP09622 509 aaKnown RBP14.26□□□□□ -0.13
GGA3-208ENST00000579743 CD44P16070 742 aaKnown RBP14.26□□□□□ -0.13
GGA3-208ENST00000579743 MARSP56192 900 aaKnown RBP14.26□□□□□ -0.13
GGA3-208ENST00000579743 SIM1P81133 766 aaPredicted RBP14.26□□□□□ -0.13
GGA3-208ENST00000579743 NNTQ13423 1086 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 MEA1Q16626 185 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 MBLAC2Q68D91 279 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 BHLHA9Q7RTU4 235 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 CREBRFQ8IUR6 639 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 MFN1Q8IWA4 741 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 TRIM59Q8IWR1 403 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 STK32AQ8WU08 396 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 DNASE2BQ8WZ79 361 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 DNAAF2Q9NVR5 837 aaKnown RBP14.26□□□□□ -0.13
GGA3-208ENST00000579743 NCKAP1Q9Y2A7 1128 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 TLR6Q9Y2C9 796 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 CACNA1BQ00975 2339 aa14.26□□□□□ -0.13
GGA3-208ENST00000579743 TNRC6BQ9UPQ9 1833 aaKnown RBP14.25□□□□□ -0.13
GGA3-208ENST00000579743 TMEM8BA6NDV4 472 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 METTL12A8MUP2 240 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 RNF225M0QZC1 329 aaPredicted RBP14.25□□□□□ -0.13
GGA3-208ENST00000579743 PIK3R2O00459 728 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 BCAT2O15382 392 aaPredicted RBP14.25□□□□□ -0.13
GGA3-208ENST00000579743 CER1O95813 267 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 IGLV3-19P01714 112 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 ASLP04424 464 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 PROS1P07225 676 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 PRKCHP24723 683 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 HLA-FP30511 346 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 STX17P56962 302 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 CAMK2GQ13555 558 aaPredicted RBP14.25□□□□□ -0.13
GGA3-208ENST00000579743 CDH18Q13634 790 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 TEAD4Q15561 434 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 TPD52L1Q16890 204 aaPredicted RBP14.25□□□□□ -0.13
GGA3-208ENST00000579743 PIK3R6Q5UE93 754 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 DCAF12L1Q5VU92 463 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 LRSAM1Q6UWE0 723 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 PIP4P1Q86T03 277 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 SCUBE3Q8IX30 993 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.25□□□□□ -0.13
GGA3-208ENST00000579743 LMO3Q8TAP4 145 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 SORCS1Q8WY21 1168 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 INTS2Q9H0H0 1204 aaKnown RBP14.25□□□□□ -0.13
GGA3-208ENST00000579743 UBE2TQ9NPD8 197 aaPredicted RBP14.25□□□□□ -0.13
GGA3-208ENST00000579743 STIM2Q9P246 746 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 CLEC4EQ9ULY5 219 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 SCML1Q9UN30 329 aa14.25□□□□□ -0.13
GGA3-208ENST00000579743 THAP12O43422 761 aa14.24□□□□□ -0.13
GGA3-208ENST00000579743 LETM1O95202 739 aaPredicted RBP14.24□□□□□ -0.13
GGA3-208ENST00000579743 IGLV3-27P01718 113 aa14.24□□□□□ -0.13
GGA3-208ENST00000579743 SLC2A3P11169 496 aa14.24□□□□□ -0.13
GGA3-208ENST00000579743 HLA-EP13747 358 aa14.24□□□□□ -0.13
GGA3-208ENST00000579743 MAOBP27338 520 aa14.24□□□□□ -0.13
GGA3-208ENST00000579743 NNMTP40261 264 aa14.24□□□□□ -0.13
GGA3-208ENST00000579743 COPAP53621 1224 aa14.24□□□□□ -0.13
GGA3-208ENST00000579743 MTA1Q13330 715 aa14.24□□□□□ -0.13
GGA3-208ENST00000579743 SUZ12Q15022 739 aaKnown RBP14.24□□□□□ -0.13
GGA3-208ENST00000579743 ZNF423Q2M1K9 1284 aa14.24□□□□□ -0.13
GGA3-208ENST00000579743 RNF219Q5W0B1 726 aaPredicted RBP14.24□□□□□ -0.13
GGA3-208ENST00000579743 TMEM215Q68D42 235 aa14.24□□□□□ -0.13
GGA3-208ENST00000579743 SMYD5Q6GMV2 418 aa14.24□□□□□ -0.13
GGA3-208ENST00000579743 RFWD3Q6PCD5 774 aa14.24□□□□□ -0.13
GGA3-208ENST00000579743 UNQ6494/PRO21346Q6UXR6 183 aa14.24□□□□□ -0.13
GGA3-208ENST00000579743 BEND5Q7L4P6 421 aa14.24□□□□□ -0.13
GGA3-208ENST00000579743 FAM124AQ86V42 546 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms