RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 CLIC4Q9Y696 253 aa9.11□□□□□ -0.95
BRIP1-204ENST00000579028 USP3Q9Y6I4 520 aa9.11□□□□□ -0.95
BRIP1-204ENST00000579028 UBE4BO95155 1302 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 A0A1W2PR77 199 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 CLIC2O15247 247 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 C4BPAP04003 597 aaKnown RBP9.1□□□□□ -0.95
BRIP1-204ENST00000579028 GLDCP23378 1020 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 HOXD9P28356 352 aaPredicted RBP9.1□□□□□ -0.95
BRIP1-204ENST00000579028 HLA-FP30511 346 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 AP3M2P53677 418 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 UCNP55089 124 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 CLDN10P78369 228 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 BIRC3Q13489 604 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 NCOA4Q13772 614 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 MPPE1Q53F39 396 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 SFMBT2Q5VUG0 894 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 ZNF776Q68DI1 518 aaPredicted RBP9.1□□□□□ -0.95
BRIP1-204ENST00000579028 USP30Q70CQ3 517 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 KIAA0907Q7Z7F0 614 aaPredicted RBP9.1□□□□□ -0.95
BRIP1-204ENST00000579028 DENND1CQ8IV53 801 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 FMNL3Q8IVF7 1028 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 C12orf56Q8IXR9 622 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 ZNF366Q8N895 744 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.1□□□□□ -0.95
BRIP1-204ENST00000579028 DCBLD1Q8N8Z6 715 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 FAM181AQ8N9Y4 354 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 ZNF248Q8NDW4 579 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 DDI1Q8WTU0 396 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 CYB5D2Q8WUJ1 264 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 GOLGA1Q92805 767 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 JAKMIP2Q96AA8 810 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 ELMO3Q96BJ8 720 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 TMX3Q96JJ7 454 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 LGMNQ99538 433 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 SEMA4CQ9C0C4 833 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 EBF2Q9HAK2 575 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 GDF3Q9NR23 364 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 RASAL2Q9UJF2 1139 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 SCML1Q9UN30 329 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 PLA2G4CQ9UP65 541 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 CLCA2Q9UQC9 943 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 COL6A6A6NMZ7 2263 aa9.1□□□□□ -0.95
BRIP1-204ENST00000579028 LRRIQ3A6PVS8 624 aaPredicted RBP9.09□□□□□ -0.95
BRIP1-204ENST00000579028 STX6O43752 255 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 VNN1O95497 513 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 HMBSP08397 361 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 DLDP09622 509 aaKnown RBP9.09□□□□□ -0.95
BRIP1-204ENST00000579028 C6P13671 934 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 P4HA1P13674 534 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 CKMT2P17540 419 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 TRIM21P19474 475 aaKnown RBP9.09□□□□□ -0.95
BRIP1-204ENST00000579028 ACP1P24666 158 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 CD38P28907 300 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 RXRGP48443 463 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 ARRB1P49407 418 aaPredicted RBP9.09□□□□□ -0.95
BRIP1-204ENST00000579028 CASP4P49662 377 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 GALCP54803 685 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 PCBP4P57723 403 aaKnown RBP9.09□□□□□ -0.95
BRIP1-204ENST00000579028 TMPRSS3P57727 454 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 ZNF445P59923 1031 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 INSM1Q01101 510 aaPredicted RBP9.09□□□□□ -0.95
BRIP1-204ENST00000579028 KCNC4Q03721 635 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 EFEMP1Q12805 493 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 SGSM1Q2NKQ1 1148 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 FAM26FQ5R3K3 315 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 BROXQ5VW32 411 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 CHST9Q7L1S5 443 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 KANSL1Q7Z3B3 1105 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 ADIPOR2Q86V24 386 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 PARD3BQ8TEW8 1205 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 SNRNP27Q8WVK2 155 aaKnown RBP9.09□□□□□ -0.95
BRIP1-204ENST00000579028 TTC9Q92623 222 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 PLD4Q96BZ4 506 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 CYFIP2Q96F07 1278 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 HIC2Q96JB3 615 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 PANK2Q9BZ23 570 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 RSPH9Q9H1X1 276 aaPredicted RBP9.09□□□□□ -0.95
BRIP1-204ENST00000579028 TNMDQ9H2S6 317 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 PABPC3Q9H361 631 aaKnown RBP9.09□□□□□ -0.95
BRIP1-204ENST00000579028 ERVMER34-1Q9H9K5 563 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 MARCH2Q9P0N8 246 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 CGNQ9P2M7 1197 aaKnown RBP9.09□□□□□ -0.95
BRIP1-204ENST00000579028 SUN2Q9UH99 717 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 ADAMTS1Q9UHI8 967 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 SMC3Q9UQE7 1217 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 NCKAP1Q9Y2A7 1128 aa9.09□□□□□ -0.95
BRIP1-204ENST00000579028 MORC2Q9Y6X9 1032 aaPredicted RBP9.09□□□□□ -0.95
BRIP1-204ENST00000579028 SLC12A8A0AV02 714 aa9.08□□□□□ -0.96
BRIP1-204ENST00000579028 FAM47DPA6NHR8 397 aa9.08□□□□□ -0.96
BRIP1-204ENST00000579028 DXOO77932 396 aaKnown RBP9.08□□□□□ -0.96
BRIP1-204ENST00000579028 CLSTN1O94985 981 aa9.08□□□□□ -0.96
BRIP1-204ENST00000579028 WISP1O95388 367 aa9.08□□□□□ -0.96
BRIP1-204ENST00000579028 ASS1P00966 412 aaKnown RBP9.08□□□□□ -0.96
BRIP1-204ENST00000579028 RPN1P04843 607 aaKnown RBP9.08□□□□□ -0.96
BRIP1-204ENST00000579028 PABPC1P11940 636 aaKnown RBP9.08□□□□□ -0.96
BRIP1-204ENST00000579028 ASPAP45381 313 aa9.08□□□□□ -0.96
BRIP1-204ENST00000579028 CCR5P51681 352 aa9.08□□□□□ -0.96
BRIP1-204ENST00000579028 NXPH1P58417 271 aa9.08□□□□□ -0.96
BRIP1-204ENST00000579028 E2F1Q01094 437 aa9.08□□□□□ -0.96
BRIP1-204ENST00000579028 INCA1Q0VD86 236 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms