RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 TTC39BQ5VTQ0 682 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 OTUD1Q5VV17 481 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 PARM1Q6UWI2 310 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 VITQ6UXI7 678 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 PEX26Q7Z412 305 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 POLNQ7Z5Q5 900 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 CHSY1Q86X52 802 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 MAP7D3Q8IWC1 876 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 RHOT1Q8IXI2 618 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 CCAR2Q8N163 923 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 CPXM2Q8N436 756 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 CPA6Q8N4T0 437 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 ZNF557Q8N988 423 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 CSGALNACT1Q8TDX6 532 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 TEKT4Q8WW24 435 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 FGF14Q92915 247 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 IRF7Q92985 503 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 EXOC4Q96A65 974 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 EPAS1Q99814 870 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 KXD1Q9BQD3 176 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 TRIM7Q9C029 511 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 BRD9Q9H8M2 597 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 DDX56Q9NY93 547 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 LIMD1Q9UGP4 676 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 PCSK1NQ9UHG2 260 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 STOML2Q9UJZ1 356 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 AGO1Q9UL18 857 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 ALG6Q9Y672 507 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 DUSP10Q9Y6W6 482 aa11.68□□□□□ -0.54
CDK5RAP3-210ENST00000578733 MIF4GDA9UHW6 222 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 PAGE1O75459 146 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 PALMO75781 387 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 ADH1CP00326 375 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 TFE3P19532 575 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 COMTP21964 271 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 GDI1P31150 447 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 HTR7P34969 479 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 ADRA1BP35368 520 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 CETN2P41208 172 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 PFKPQ01813 784 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 ZP2Q05996 745 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 KRT81Q14533 505 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 MPPE1Q53F39 396 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 SH3PXD2AQ5TCZ1 1133 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 Q6ZNB5 142 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 BBS7Q8IWZ6 715 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 UBL4BQ8N7F7 174 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 C1orf74Q96LT6 269 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 OSBPL2Q9H1P3 480 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 ZWILCHQ9H900 591 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 KCNK12Q9HB15 430 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 TRMT1Q9NXH9 659 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 DONSONQ9NYP3 566 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 CALCOCO1Q9P1Z2 691 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 STIM2Q9P246 746 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 TRIM10Q9UDY6 481 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 FZD10Q9ULW2 581 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 PYCARDQ9ULZ3 195 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 AP4E1Q9UPM8 1137 aa11.67□□□□□ -0.54
CDK5RAP3-210ENST00000578733 NUP205Q92621 2012 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 CCDC66A2RUB6 948 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 TNNT1P13805 278 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 TACR2P21452 398 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 GJC1P36383 396 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 ARL4AP40617 200 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 ATXN1P54253 815 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 ZXDBP98169 803 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 TDGQ13569 410 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 PREPLQ4J6C6 727 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 MS4A13Q5J8X5 152 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 LRRC38Q5VT99 294 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 POTEHQ6S545 545 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 REXO1L1PQ8IX06 675 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 CCDC185Q8N715 623 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 HJURPQ8NCD3 748 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 DDI1Q8WTU0 396 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 DNASE1L2Q92874 299 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 RBM41Q96IZ5 413 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 SIK2Q9H0K1 926 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 DHX35Q9H5Z1 703 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 RETREG1Q9H6L5 497 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 SALL4Q9UJQ4 1053 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 ZKSCAN5Q9Y2L8 839 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 HS3ST4Q9Y661 456 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 WNT6Q9Y6F9 365 aa11.66□□□□□ -0.54
CDK5RAP3-210ENST00000578733 CHD5Q8TDI0 1954 aa11.65□□□□□ -0.54
CDK5RAP3-210ENST00000578733 SHROOM3Q8TF72 1996 aa11.65□□□□□ -0.54
CDK5RAP3-210ENST00000578733 GRID2IPA4D2P6 1211 aa11.65□□□□□ -0.54
CDK5RAP3-210ENST00000578733 H3BRJ5 948 aa11.65□□□□□ -0.54
CDK5RAP3-210ENST00000578733 DAPK3O43293 454 aa11.65□□□□□ -0.54
CDK5RAP3-210ENST00000578733 KLKB1P03952 638 aa11.65□□□□□ -0.54
CDK5RAP3-210ENST00000578733 RARAP10276 462 aa11.65□□□□□ -0.54
CDK5RAP3-210ENST00000578733 CTNNA2P26232 953 aa11.65□□□□□ -0.54
CDK5RAP3-210ENST00000578733 L1CAMP32004 1257 aa11.65□□□□□ -0.54
CDK5RAP3-210ENST00000578733 MLLT6P55198 1093 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-210ENST00000578733 NRG1Q02297 640 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-210ENST00000578733 SLC25A11Q02978 314 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-210ENST00000578733 GAD2Q05329 585 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms