RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 FBXO43Q4G163 708 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 TMEM119Q4V9L6 283 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 HYIQ5T013 277 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 EMC10Q5UCC4 262 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 ARMCX5Q6P1M9 558 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 CRELD2Q6UXH1 353 aaPredicted RBP4.23□□□□□ -1.73
PTPRM-206ENST00000578093 MON1AQ86VX9 555 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 DEFB119Q8N690 84 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 ALLCQ8N6M5 410 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 SYT2Q8N9I0 419 aaPredicted RBP4.23□□□□□ -1.73
PTPRM-206ENST00000578093 OR6P1Q8NGX9 317 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 SH3RF2Q8TEC5 729 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 OSCP1Q8WVF1 389 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 MRPS31Q92665 395 aaKnown RBP4.23□□□□□ -1.73
PTPRM-206ENST00000578093 ERLEC1Q96DZ1 483 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 BICD1Q96G01 975 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 C8orf76Q96K31 380 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 REEP2Q9BRK0 252 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 NTPCRQ9BSD7 190 aaKnown RBP4.23□□□□□ -1.73
PTPRM-206ENST00000578093 CCSER1Q9C0I3 900 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 RPF1Q9H9Y2 349 aaKnown RBP4.23□□□□□ -1.73
PTPRM-206ENST00000578093 C17orf75Q9HAS0 396 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 PLEKHA5Q9HAU0 1116 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 DUS2Q9NX74 493 aaKnown RBP4.23□□□□□ -1.73
PTPRM-206ENST00000578093 GMIPQ9P107 970 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 TJP2Q9UDY2 1190 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 KLHL3Q9UH77 587 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 EVLQ9UI08 416 aaPredicted RBP4.23□□□□□ -1.73
PTPRM-206ENST00000578093 L1RE1Q9UN81 338 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 DNM3Q9UQ16 869 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 MSRB2Q9Y3D2 182 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 NME7Q9Y5B8 376 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 PLXNA2O75051 1894 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 NYNRINQ9P2P1 1898 aaKnown RBP4.23□□□□□ -1.73
PTPRM-206ENST00000578093 SHROOM3Q8TF72 1996 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 MAST4O15021 2626 aa4.23□□□□□ -1.73
PTPRM-206ENST00000578093 CKAP5Q14008 2032 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 PTPRJQ12913 1337 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 NUMA1Q14980 2115 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 SPENQ96T58 3664 aaKnown RBP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 TRAV19A0A0A6YYK7 116 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 A0A0B4J269 797 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 CYSRT1A8MQ03 144 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 LEFTY2O00292 366 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 TRIM24O15164 1050 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 XPOTO43592 962 aaKnown RBP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 ATP2C2O75185 946 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 KLF8O95600 359 aaPredicted RBP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 ITGB3P05106 788 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 CFIP05156 583 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 PLA2G4BP0C869 781 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 CSH1P0DML2 217 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 CSH2P0DML3 217 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 CD59P13987 128 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 POLR2BP30876 1174 aaKnown RBP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 KIR2DL1P43626 348 aaPredicted RBP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 NASPP49321 788 aaPredicted RBP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 CACNA2D1P54289 1103 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 ANAPC15P60006 121 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 PSMC1P62191 440 aaKnown RBP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 GRIN1Q05586 938 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 SCAPQ12770 1279 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 SLBPQ14493 270 aaKnown RBP eCLIP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 PDIA5Q14554 519 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 DHX8Q14562 1220 aaKnown RBP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 PTPAQ15257 358 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 ANKRD1Q15327 319 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 TAF12Q16514 161 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 CPSF6Q16630 551 aaKnown RBP eCLIP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 USP39Q53GS9 565 aaKnown RBP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 LYSMD4Q5XG99 296 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 KRT79Q5XKE5 535 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 CC2D1AQ6P1N0 951 aaPredicted RBP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 SEZ6L2Q6UXD5 910 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 FILIP1Q7Z7B0 1213 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 ZAR1Q86SH2 424 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 GPBP1Q86WP2 473 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 MARCH9Q86YJ5 346 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 MIB1Q86YT6 1006 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 SYT12Q8IV01 421 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 SLC41A1Q8IVJ1 513 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 SCN4BQ8IWT1 228 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 PDCL2Q8N4E4 241 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 MINDY1Q8N5J2 469 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 PNPLA1Q8N8W4 532 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 IL17RCQ8NAC3 791 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 TXNDC5Q8NBS9 432 aaKnown RBP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 FBXO18Q8NFZ0 1043 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 CXorf38Q8TB03 319 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 MDM1Q8TC05 714 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 C2orf15Q8WU43 125 aaKnown RBP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 LEO1Q8WVC0 666 aaPredicted RBP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 HMGB4Q8WW32 186 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 KCNN1Q92952 543 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 ATP2A3Q93084 1043 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 WBP2Q969T9 261 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 MYLPFQ96A32 169 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 TRMT2BQ96GJ1 504 aaKnown RBP4.22□□□□□ -1.73
PTPRM-206ENST00000578093 CCDC74BQ96LY2 380 aa4.22□□□□□ -1.73
PTPRM-206ENST00000578093 MSTO1Q9BUK6 570 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms