RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 GRIN1Q05586 938 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ADIGQ0VDE8 80 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 NAA25Q14CX7 972 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PDK2Q15119 407 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ITPRIPL2Q3MIP1 535 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ATAD3BQ5T9A4 648 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 NLRP9Q7RTR0 991 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 C16orf62Q7Z3J2 963 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 MON1AQ86VX9 555 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PARGQ86W56 976 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CELF5Q8N6W0 485 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 C1orf131Q8NDD1 294 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 REPS1Q96D71 796 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CDCA3Q99618 268 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 C7orf25Q9BPX7 421 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 DESI2Q9BSY9 194 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 LMAN2LQ9H0V9 348 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 SFXN1Q9H9B4 322 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 NEK6Q9HC98 313 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 RAB6BQ9NRW1 208 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 FGFR1OP2Q9NVK5 253 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ZSCAN32Q9NX65 697 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 SYBUQ9NX95 663 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 RABGEF1Q9UJ41 708 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PNMA8BQ9ULN7 279 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 COG5Q9UP83 839 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TRIM33Q9UPN9 1127 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 DNAJC16Q9Y2G8 782 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PCDHGB3Q9Y5G1 929 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CNTNAP5Q8WYK1 1306 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CCDC195A0A1B0GUA6 201 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 YDJCA8MPS7 323 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 F8VP50 259 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 NDUFAB1O14561 156 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CHUKO15111 745 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 TIMM44O43615 452 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ZBTB14O43829 449 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 GLP2RO95838 553 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 JCHAINP01591 159 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 MAPTP10636 758 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PYGBP11216 843 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 BRCC3P46736 316 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 RHBDL3P58872 404 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 OC90Q02509 493 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 RGS1Q08116 209 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 RALGDSQ12967 914 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ITGA9Q13797 1035 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 KRT31Q15323 416 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 E2F4Q16254 413 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CCL14Q16627 93 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ANKRD20A4Q4UJ75 823 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ANKRD20A2Q5SQ80 823 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ANKRD20A1Q5TYW2 823 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ANO7Q6IWH7 933 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 B4GALNT4Q76KP1 1039 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 KSR1Q8IVT5 923 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 BRSK2Q8IWQ3 736 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 KLHL23Q8NBE8 558 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 FEZF2Q8TBJ5 459 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 FAM172AQ8WUF8 416 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 SLC22A17Q8WUG5 538 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CAPSLQ8WWF8 208 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 RFFLQ8WZ73 363 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 FOXJ1Q92949 421 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 UBE2E3Q969T4 207 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 Q9H521 79 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 C8orf33Q9H7E9 229 aaPredicted RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CNOT10Q9H9A5 744 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 MRPL40Q9NQ50 206 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 AGPAT3Q9NRZ7 376 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CISHQ9NSE2 258 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 SUCOQ9UBS9 1254 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 VANGL2Q9ULK5 521 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 SNX6Q9UNH7 406 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 PPIEQ9UNP9 301 aaKnown RBP3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 ERVK-11Q9UQG0 969 aa3.01□□□□□ -1.93
SMCHD1-203ENST00000577880 CLUHO75153 1309 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 ANKDD1BA6NHY2 528 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 LGALS16A8MUM7 142 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 H3BMM5 538 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 SMAPO00193 183 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 SLC31A1O15431 190 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 OR10H2O60403 315 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 PLA2G6O60733 806 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 CCNDBP1O95273 360 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 RBP3P10745 1247 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 ESRRAP11474 423 aaPredicted RBP3□□□□□ -1.93
SMCHD1-203ENST00000577880 PCNAP12004 261 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 ALAS2P22557 587 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 STIP1P31948 543 aaKnown RBP3□□□□□ -1.93
SMCHD1-203ENST00000577880 RFX5P48382 616 aaPredicted RBP3□□□□□ -1.93
SMCHD1-203ENST00000577880 RBL2Q08999 1139 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 IFT88Q13099 833 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 ORC1Q13415 861 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 MYBPC2Q14324 1141 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 MAPRE2Q15555 327 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 PAGE2BQ5JRK9 111 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 EMC10Q5UCC4 262 aa3□□□□□ -1.93
SMCHD1-203ENST00000577880 ICE2Q659A1 982 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms