RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 ZFRQ96KR1 1074 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SERPINB11Q96P15 392 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 KLF16Q9BXK1 252 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TMEM121BQ9BXQ6 578 aaPredicted RBP11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ATXN3LQ9H3M9 355 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CCSER2Q9H7U1 834 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PIDD1Q9HB75 910 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TRMT1Q9NXH9 659 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CALCOCO1Q9P1Z2 691 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 LHX6Q9UPM6 363 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 DSPP15924 2871 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 DOCK6Q96HP0 2047 aa11.58□□□□□ -0.56
CDK5RAP3-204ENST00000577664 C2orf78A6NCI8 922 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 M0QYT0 321 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 BUB1O43683 1085 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 NARSO43776 548 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TBX18O95935 607 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SLC2A3P11169 496 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MYL4P12829 197 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 DESP17661 470 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 HDCP19113 662 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TFE3P19532 575 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PSMA2P25787 234 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 RDXP35241 583 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PITX1P78337 314 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SCAPQ12770 1279 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 IFRD2Q12894 506 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 C15orf59Q2T9L4 293 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ARHGAP15Q53QZ3 475 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 BOLA3Q53S33 107 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SH3PXD2AQ5TCZ1 1133 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TXNDC8Q6A555 127 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 NYAP1Q6ZVC0 841 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CYP4V2Q6ZWL3 525 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 OTOP3Q7RTS5 596 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 POLNQ7Z5Q5 900 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 NT5DC3Q86UY8 548 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CMTM8Q8IZV2 173 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 FAM71BQ8TC56 605 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 NTAN1Q96AB6 310 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TCEAL4Q96EI5 215 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 BTBD6Q96KE9 485 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 C1orf74Q96LT6 269 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 GCNAQ96QF7 691 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TBCBQ99426 244 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 IRX2Q9BZI1 471 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ZSCAN32Q9NX65 697 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ARHGEF38Q9NXL2 777 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 OBP2AQ9NY56 170 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MARCH2Q9P0N8 246 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 STOML2Q9UJZ1 356 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 GMEB2Q9UKD1 530 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ARHGAP26Q9UNA1 814 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MRPS23Q9Y3D9 190 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PAXBP1Q9Y5B6 917 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CAPN6Q9Y6Q1 641 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 C2orf16Q68DN1 1984 aa11.57□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TRAV19A0A0A6YYK7 116 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 FAM170AA1A519 330 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MACROD2A1Z1Q3 448 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SRRM3A6NNA2 597 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TM4SF5O14894 197 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MDM4O15151 490 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 GREM1O60565 184 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PALMO75781 387 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MOCS3O95396 460 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 LATS1O95835 1130 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 COMTP21964 271 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 FSHRP23945 695 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MIPP30301 263 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ADRA1BP35368 520 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PEX5P50542 639 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 NTHL1P78549 312 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ZXDBP98169 803 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 NRG1Q02297 640 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SLC25A11Q02978 314 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 DEUP1Q05D60 604 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MESDQ14696 234 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TEAD2Q15562 447 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 C10orf120Q5SQS8 335 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 MEI1Q5TIA1 1274 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CC2D1AQ6P1N0 951 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 HTR3DQ70Z44 454 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 RSRC2Q7L4I2 434 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 DAAM2Q86T65 1068 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TAC4Q86UU9 113 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 VSIG1Q86XK7 387 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PJA1Q8NG27 643 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 ITFG1Q8TB96 612 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 FAM172AQ8WUF8 416 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 TEKT4Q8WW24 435 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 PLD4Q96BZ4 506 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 HES6Q96HZ4 224 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 FCRL2Q96LA5 508 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 SLC22A12Q96S37 553 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 HAPLN3Q96S86 360 aa11.56□□□□□ -0.56
CDK5RAP3-204ENST00000577664 CYP2S1Q96SQ9 504 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms