RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 NAT16Q8N8M0 369 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TERB1Q8NA31 727 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 RXFP2Q8WXD0 754 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 BHMTQ93088 406 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ACDQ96AP0 544 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TMA16Q96EY4 203 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 MCEEQ96PE7 176 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 WDCPQ9H6R7 721 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PARVAQ9NVD7 372 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 SPATA6Q9NWH7 488 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ARHGAP20Q9P2F6 1191 aa13.18□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TCRBV5S1A1TA0A578 114 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TBC1D3BA6NDS4 549 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 GFRA2O00451 464 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 LAMTOR5O43504 91 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TSPAN3O60637 253 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PLEKP08567 350 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TACR2P21452 398 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 EIF4A3P38919 411 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TNFRSF4P43489 277 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CCR3P51677 355 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TBX2Q13207 712 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 MAPK8IP2Q13387 824 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 FZD5Q13467 585 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 E2F5Q15329 346 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 MS4A13Q5J8X5 152 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 RABGAP1LQ5R372 815 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PIK3R6Q5UE93 754 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TTC39BQ5VTQ0 682 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 NAIF1Q69YI7 327 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 NADSYN1Q6IA69 706 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PLEKHA7Q6IQ23 1121 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 MAMSTRQ6ZN01 415 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 C1orf210Q8IVY1 113 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 SPEM1Q8N4L4 309 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 JOSD2Q8TAC2 188 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CFAP57Q96MR6 1250 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 IRF2BPLQ9H1B7 796 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ISCUQ9H1K1 167 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 MRPL47Q9HD33 250 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 RBM12Q9NTZ6 932 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PIGVQ9NUD9 493 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PLK2Q9NYY3 685 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CNOT8Q9UFF9 292 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 SLC27A6Q9Y2P4 619 aa13.17□□□□□ -0.3
CDK5RAP3-203ENST00000577442 A0A0A0MRY4 1105 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 AKR1B10O60218 316 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TBL1XO60907 577 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 RNF40O75150 1001 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ENDOD1O94919 500 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 HOXD9P28356 352 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 SLC6A4P31645 630 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 RFC1P35251 1148 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 SLC6A11P48066 632 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ZNF143P52747 638 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PTPN5P54829 565 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ADKP55263 362 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 MRPS21P82921 87 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ATP11AP98196 1134 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 MTAPQ13126 283 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 MAMLD1Q13495 774 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CDO1Q16878 200 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ARL13BQ3SXY8 428 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CCDC14Q49A88 953 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 HSF5Q4G112 596 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PPP1R15BQ5SWA1 713 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 C10orf76Q5T2E6 689 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 RAP1GAP2Q684P5 730 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 RNF43Q68DV7 783 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TRNP1Q6NT89 227 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ALKBH5Q6P6C2 394 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 RFWD3Q6PCD5 774 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 WDR59Q6PJI9 974 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 BNIPLQ7Z465 357 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TRMT11Q7Z4G4 463 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ANKS1BQ7Z6G8 1248 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 LGI2Q8N0V4 545 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PHTF2Q8N3S3 785 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 KCNV2Q8TDN2 545 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 WFIKKN2Q8TEU8 576 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 FAM172AQ8WUF8 416 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CNPY3Q9BT09 278 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TKTL2Q9H0I9 626 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 FBRSL1Q9HCM7 1045 aaKnown RBP13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ARHGEF38Q9NXL2 777 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 FBXO10Q9UK96 956 aa13.16□□□□□ -0.3
CDK5RAP3-203ENST00000577442 RIF1Q5UIP0 2472 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 A0A087X0T9 212 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 GOLGA6L7A0A1B0GV03 622 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 GOLGA6L6A8MZA4 724 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CHURC1-FNTBB4DL54 471 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 ATMINO43313 823 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 PAGE1O75459 146 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 GJB6O95452 261 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 FAM228BP0C875 321 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 TFE3P19532 575 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CDC25BP30305 580 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 CDH18Q13634 790 aa13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 EIF4HQ15056 248 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-203ENST00000577442 SLC18A3Q16572 532 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms