RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 CYP3A7-CYP3A51PA0A087WV96 503 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 CCDC187A0A096LP49 1063 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 LINC01548A6NM66 108 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 DSCR3O14972 297 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 CA12O43570 354 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 RPP40O75818 363 aaKnown RBP2.85□□□□□ -1.95
COPS3-213ENST00000577210 TNFRSF6BO95407 300 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 TK1P04183 234 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 BMP5P22003 454 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 CYP3A7P24462 503 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 GALNSP34059 522 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 THBS4P35443 961 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 HOXD12P35452 270 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 PLA2G5P39877 138 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 PSG6Q00889 435 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 SMAD1Q15797 465 aaKnown RBP2.85□□□□□ -1.95
COPS3-213ENST00000577210 SMN1Q16637 294 aaKnown RBP2.85□□□□□ -1.95
COPS3-213ENST00000577210 CTXN3Q4LDR2 81 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 PRAMEF17Q5VTA0 474 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 ANKRD40Q6AI12 368 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 FBXO42Q6P3S6 717 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 PCSK4Q6UW60 755 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 RANBP10Q6VN20 620 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 SLC39A5Q6ZMH5 540 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 LDHAL6AQ6ZMR3 332 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 ZNF813Q6ZN06 617 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 RD3Q7Z3Z2 195 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 UBE2Q1Q7Z7E8 422 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 ADGRG3Q86Y34 549 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 ENDOVQ8N8Q3 282 aaKnown RBP2.85□□□□□ -1.95
COPS3-213ENST00000577210 SLC2A12Q8TD20 617 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 ASB12Q8WXK4 309 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 NPIPB3Q92617 1050 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 GOLGA1Q92805 767 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 USP13Q92995 863 aaPredicted RBP2.85□□□□□ -1.95
COPS3-213ENST00000577210 TBC1D20Q96BZ9 403 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 ZNF845Q96IR2 970 aaPredicted RBP2.85□□□□□ -1.95
COPS3-213ENST00000577210 FAM118BQ9BPY3 351 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 SORBS1Q9BX66 1292 aaKnown RBP2.85□□□□□ -1.95
COPS3-213ENST00000577210 TWSG1Q9GZX9 223 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 NUAK2Q9H093 628 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 SYNPO2LQ9H987 977 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 VPS45Q9NRW7 570 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 ASB6Q9NWX5 421 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 GRHPRQ9UBQ7 328 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.85□□□□□ -1.95
COPS3-213ENST00000577210 PGAP2Q9UHJ9 254 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 IPO11Q9UI26 975 aaKnown RBP2.85□□□□□ -1.95
COPS3-213ENST00000577210 GTF2A1LQ9UNN4 478 aa2.85□□□□□ -1.95
COPS3-213ENST00000577210 LOC105369274A0A096LPK9 316 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 LOC102723532A0A0G2JNH3 316 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.84□□□□□ -1.95
COPS3-213ENST00000577210 FAM90A18PA6NE21 464 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 FAM90A16PA6NEW6 464 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 FAM90A9PA6NNJ1 464 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 FAM90A5PA8MXJ8 464 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 E7EVH7 732 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 H0Y3Z8 333 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 IPO5O00410 1097 aaKnown RBP2.84□□□□□ -1.95
COPS3-213ENST00000577210 FYB1O15117 783 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 PPP6R2O75170 966 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 GUCY1B2O75343 617 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 PDE8BO95263 885 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 HLA-DQA2P01906 255 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 TUBB4AP04350 444 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 ERBB2P04626 1255 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 FAM90A15PP0C7V4 464 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 FAM90A14PP0C7W9 464 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 AKR1A1P14550 325 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 IGFBP2P18065 325 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 TGM2P21980 687 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 FPR3P25089 353 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 KLRK1P26718 216 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 STAT1P42224 750 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 RBM5P52756 815 aaKnown RBP eCLIP2.84□□□□□ -1.95
COPS3-213ENST00000577210 RAE1P78406 368 aaKnown RBP2.84□□□□□ -1.95
COPS3-213ENST00000577210 DEUP1Q05D60 604 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 FOXF2Q12947 444 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 FHL3Q13643 280 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 POSTNQ15063 836 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 TIGD6Q17RP2 521 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 SYCE2Q6PIF2 218 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 RASGRP2Q7LDG7 609 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 ANKS1BQ7Z6G8 1248 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 C2CD5Q86YS7 1000 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 FTSJ3Q8IY81 847 aaKnown RBP2.84□□□□□ -1.95
COPS3-213ENST00000577210 OR4N4Q8N0Y3 316 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 ANKRD44Q8N8A2 993 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 PTGR2Q8N8N7 351 aaPredicted RBP2.84□□□□□ -1.95
COPS3-213ENST00000577210 PNLDC1Q8NA58 520 aaKnown RBP2.84□□□□□ -1.95
COPS3-213ENST00000577210 CUL5Q93034 780 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 REPS1Q96D71 796 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 AGAP2Q99490 1192 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 VPS16Q9H269 839 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 SAP30LQ9HAJ7 183 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 FSCN3Q9NQT6 498 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 IL17RBQ9NRM6 502 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 FLRT1Q9NZU1 646 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 LUZP4Q9P127 313 aa2.84□□□□□ -1.95
COPS3-213ENST00000577210 LPAR3Q9UBY5 353 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms