RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 C1orf220Q5T0J3 134 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 HES3Q5TGS1 186 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 KIAA0895LQ68EN5 471 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 CNNM4Q6P4Q7 775 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 FBXL19Q6PCT2 694 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 RSRC2Q7L4I2 434 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 FAM217AQ8IXS0 508 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 LSM14AQ8ND56 463 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 SAP25Q8TEE9 199 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 GANCQ8TET4 914 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 TAF4BQ92750 862 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 FGF11Q92914 225 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 CDK5RAP1Q96SZ6 601 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 ACE2Q9BYF1 805 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 NRSN2Q9GZP1 204 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 SGK2Q9HBY8 427 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 APOBEC3GQ9HC16 384 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 ABCB8Q9NUT2 735 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 DMAC2Q9NW81 257 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 CGNQ9P2M7 1197 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 CFAP46Q8IYW2 2715 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 MUC22E2RYF6 1773 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 UBE4BO95155 1302 aa10.57□□□□□ -0.72
NPLOC4-220ENST00000576940 MYLKQ15746 1914 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 A0A1W2PPC4 97 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 CAPN9O14815 690 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 C1SP09871 688 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 ACADVLP49748 655 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 SGSHP51688 502 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 GALCP54803 685 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 YWHAGP61981 247 aaKnown RBP eCLIP10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 CXADRP78310 365 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 ZBTB16Q05516 673 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 INCA1Q0VD86 236 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 CUL4BQ13620 913 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 STK38Q15208 465 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 INAVAQ3KP66 663 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 MBLAC2Q68D91 279 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 SHC4Q6S5L8 630 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 IQUBQ8NA54 791 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 LINC00301Q8NCQ3 95 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 TSC1Q92574 1164 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 TMA16Q96EY4 203 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 HEXIM2Q96MH2 286 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 NEUROG2Q9H2A3 272 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 CUEDC2Q9H467 287 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 FBXL12Q9NXK8 326 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 SERGEFQ9UGK8 458 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 SUN2Q9UH99 717 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 SFMBT1Q9UHJ3 866 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 STRIP2Q9ULQ0 834 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 NCKAP1Q9Y2A7 1128 aa10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 MORC2Q9Y6X9 1032 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-220ENST00000576940 PLXNA2O75051 1894 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 TEX51A0A1B0GUA7 166 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 GOLGA6L7A0A1B0GV03 622 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 A0A1W2PP55 124 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 PYCARD-AS1I3L0S3 204 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 J3QKU1 62 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 POLR2DO15514 142 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 BRINP1O60477 761 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 DLDP09622 509 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 PABPC1P11940 636 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 TRIM21P19474 475 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 PDCP20941 246 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 CD38P28907 300 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 CD70P32970 193 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 PIK3CAP42336 1068 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 AFMP43652 599 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 NASPP49321 788 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 TLE3Q04726 772 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 STK4Q13043 487 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 CUL4AQ13619 759 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 KCNJ12Q14500 433 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 TRIP4Q15650 581 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 TTC31Q49AM3 519 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 ZNF776Q68DI1 518 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 NCEH1Q6PIU2 408 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 KIAA0907Q7Z7F0 614 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 PIGZQ86VD9 579 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 FMNL3Q8IVF7 1028 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 SNIP1Q8TAD8 396 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 WFDC5Q8TCV5 224 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 WFIKKN2Q8TEU8 576 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 BAP1Q92560 729 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 PLD4Q96BZ4 506 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 TMEM176AQ96HP8 235 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 NAF1Q96HR8 494 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 RSPH9Q9H1X1 276 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 PABPC3Q9H361 631 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 AASDHPPTQ9NRN7 309 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 GGA2Q9UJY4 613 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 MTMR6Q9Y217 621 aa10.55□□□□□ -0.72
NPLOC4-220ENST00000576940 PVALEFA0A1B0GWK0 134 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 A0A1W2PR77 199 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 TULP2O00295 520 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 IKBKBO14920 756 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 SPTLC2O15270 562 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 MID1O15344 667 aa10.54□□□□□ -0.72
NPLOC4-220ENST00000576940 SIN3BO75182 1162 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms