RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 Q4G0T1 1027 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 WIPF2Q8TF74 440 aaPredicted RBP6.01□□□□□ -1.45
NUP88-213ENST00000576862 FAR2Q96K12 515 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 RMDN3Q96TC7 470 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 SENP7Q9BQF6 1050 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 C1QTNF7Q9BXJ2 289 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 ZBTB1Q9Y2K1 713 aa6.01□□□□□ -1.45
NUP88-213ENST00000576862 SPATA31A5Q5VU36 1347 aa6□□□□□ -1.45
NUP88-213ENST00000576862 SPATA31A7Q8IWB4 1347 aa6□□□□□ -1.45
NUP88-213ENST00000576862 INPPL1O15357 1258 aa6□□□□□ -1.45
NUP88-213ENST00000576862 TOP3BO95985 862 aaKnown RBP6□□□□□ -1.45
NUP88-213ENST00000576862 SLC3A2P08195 630 aaKnown RBP6□□□□□ -1.45
NUP88-213ENST00000576862 FOXL2P58012 376 aa6□□□□□ -1.45
NUP88-213ENST00000576862 RPL15P61313 204 aaKnown RBP6□□□□□ -1.45
NUP88-213ENST00000576862 GHRHRQ02643 423 aa6□□□□□ -1.45
NUP88-213ENST00000576862 C10orf62Q5T681 223 aaPredicted RBP6□□□□□ -1.45
NUP88-213ENST00000576862 ANKRD40Q6AI12 368 aa6□□□□□ -1.45
NUP88-213ENST00000576862 RBM44Q6ZP01 1051 aaKnown RBP6□□□□□ -1.45
NUP88-213ENST00000576862 CACNA2D3Q8IZS8 1091 aa6□□□□□ -1.45
NUP88-213ENST00000576862 STT3BQ8TCJ2 826 aa6□□□□□ -1.45
NUP88-213ENST00000576862 PMM1Q92871 262 aa6□□□□□ -1.45
NUP88-213ENST00000576862 GPR78Q96P69 363 aa6□□□□□ -1.45
NUP88-213ENST00000576862 SIGLEC11Q96RL6 698 aa6□□□□□ -1.45
NUP88-213ENST00000576862 LRFN1Q9P244 771 aa6□□□□□ -1.45
NUP88-213ENST00000576862 NFU1Q9UMS0 254 aa6□□□□□ -1.45
NUP88-213ENST00000576862 CNTN6Q9UQ52 1028 aa6□□□□□ -1.45
NUP88-213ENST00000576862 SLC22A23A1A5C7 686 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 INO80B-WBP1J3KQ70 363 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 ADAM10O14672 748 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 RFPL3SP0C7P2 107 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 CDK4P11802 303 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 ST6GAL1P15907 406 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 RPS6KB1P23443 525 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 ZNF81P51508 661 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 HSF1Q00613 529 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 BIRC2Q13490 618 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 TRIM14Q14142 442 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 KRT72Q14CN4 511 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 EARS2Q5JPH6 523 aaKnown RBP5.99□□□□□ -1.45
NUP88-213ENST00000576862 C11orf87Q6NUJ2 197 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 UBE2Q1Q7Z7E8 422 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 SCAMP5Q8TAC9 235 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 PIGKQ92643 395 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 RPL36ALQ969Q0 106 aaKnown RBP5.99□□□□□ -1.45
NUP88-213ENST00000576862 REXO5Q96IC2 774 aaKnown RBP5.99□□□□□ -1.45
NUP88-213ENST00000576862 RTKNQ9BST9 563 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 SLC29A3Q9BZD2 475 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 SPRTNQ9H040 489 aaPredicted RBP5.99□□□□□ -1.45
NUP88-213ENST00000576862 CCDC134Q9H6E4 229 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 PRDM8Q9NQV8 689 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 DACT1Q9NYF0 836 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 HERC5Q9UII4 1024 aaKnown RBP5.99□□□□□ -1.45
NUP88-213ENST00000576862 RAB21Q9UL25 225 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 TNFRSF18Q9Y5U5 241 aa5.99□□□□□ -1.45
NUP88-213ENST00000576862 C2CD4BA6NLJ0 364 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 SLC38A8A6NNN8 435 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 PPP6R2O75170 966 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 PEX14O75381 377 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 LDHAP00338 332 aaKnown RBP5.98□□□□□ -1.45
NUP88-213ENST00000576862 ITGA2BP08514 1039 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 CTSAP10619 480 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 IGFBP2P18065 325 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 SLC37A1P57057 533 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 TAS2R50P59544 299 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 TLE3Q04726 772 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 SF3A3Q12874 501 aaKnown RBP eCLIP5.98□□□□□ -1.45
NUP88-213ENST00000576862 MTA1Q13330 715 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 OS9Q13438 667 aaPredicted RBP5.98□□□□□ -1.45
NUP88-213ENST00000576862 BLMHQ13867 455 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 TRIP6Q15654 476 aaKnown RBP5.98□□□□□ -1.45
NUP88-213ENST00000576862 ETFDHQ16134 617 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 CCDC38Q502W7 563 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 ZNF425Q6IV72 752 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 ANO7Q6IWH7 933 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 WDR93Q6P2C0 686 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 RHPN2Q8IUC4 686 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 SLC44A2Q8IWA5 706 aaPredicted RBP5.98□□□□□ -1.45
NUP88-213ENST00000576862 EXD3Q8N9H8 876 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 COQ8BQ96D53 544 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 VPS16Q9H269 839 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 PABPC3Q9H361 631 aaKnown RBP5.98□□□□□ -1.45
NUP88-213ENST00000576862 MLXIPQ9HAP2 919 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 TMEM184CQ9NVA4 438 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 RNF7Q9UBF6 113 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 TRPC5Q9UL62 973 aaPredicted RBP5.98□□□□□ -1.45
NUP88-213ENST00000576862 DAPP1Q9UN19 280 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 LZTS1Q9Y250 596 aa5.98□□□□□ -1.45
NUP88-213ENST00000576862 SETD1BQ9UPS6 1966 aaKnown RBP5.98□□□□□ -1.45
NUP88-213ENST00000576862 ACTL6BO94805 426 aa5.97□□□□□ -1.45
NUP88-213ENST00000576862 ENO1P06733 434 aaKnown RBP5.97□□□□□ -1.45
NUP88-213ENST00000576862 CYP3A4P08684 503 aa5.97□□□□□ -1.45
NUP88-213ENST00000576862 VEGFAP15692 232 aaPredicted RBP5.97□□□□□ -1.45
NUP88-213ENST00000576862 ZNF91Q05481 1191 aa5.97□□□□□ -1.45
NUP88-213ENST00000576862 FOXO1Q12778 655 aa5.97□□□□□ -1.45
NUP88-213ENST00000576862 TANGO2Q6ICL3 276 aa5.97□□□□□ -1.45
NUP88-213ENST00000576862 SULT6B1Q6IMI4 303 aa5.97□□□□□ -1.45
NUP88-213ENST00000576862 CCDC174Q6PII3 467 aa5.97□□□□□ -1.45
NUP88-213ENST00000576862 ZNF474Q6S9Z5 364 aaPredicted RBP5.97□□□□□ -1.45
NUP88-213ENST00000576862 SLC39A5Q6ZMH5 540 aa5.97□□□□□ -1.45
NUP88-213ENST00000576862 DEF8Q6ZN54 512 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms