RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 MRGPRX1Q96LB2 322 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 NOX5Q96PH1 765 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 DDX50Q9BQ39 737 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 PDCL3Q9H2J4 239 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 SYNCQ9H7C4 482 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 PRDM16Q9HAZ2 1276 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 CD248Q9HCU0 757 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 PLCB1Q9NQ66 1216 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 TJP2Q9UDY2 1190 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 GGA2Q9UJY4 613 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 TLR6Q9Y2C9 796 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 SYNJ2BP-COX16A0A087WUM0 186 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 IGHV1OR15-9A0A0B4J2B8 117 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 FOXN3O00409 490 aaPredicted RBP13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 IRAK2O43187 625 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 TIMM44O43615 452 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 NDUFS2O75306 463 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 APOEP02649 317 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 PABPC1P11940 636 aaKnown RBP13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 LIMK1P53667 647 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 TAF5Q15542 800 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 DCAF6Q58WW2 860 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 CT47A1Q5JQC4 288 aaPredicted RBP13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 PPM1JQ5JR12 505 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 PIK3R6Q5UE93 754 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 NADSYN1Q6IA69 706 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 OR6B2Q6IFH4 312 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 SLC47A2Q86VL8 602 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 MFN1Q8IWA4 741 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 CCDC117Q8IWD4 279 aaPredicted RBP13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 AHI1Q8N157 1196 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 CARNMT1Q8N4J0 409 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 HJURPQ8NCD3 748 aaPredicted RBP13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 C1orf131Q8NDD1 294 aaKnown RBP13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 ENOX1Q8TC92 643 aaKnown RBP13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 WFIKKN2Q8TEU8 576 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 CYB5D2Q8WUJ1 264 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 CPXM1Q96SM3 734 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 FAM204AQ9H8W3 233 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 CD93Q9NPY3 652 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 TAB2Q9NYJ8 693 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 COX16Q9P0S2 106 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 TMEM63CQ9P1W3 806 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 PLA2G4CQ9UP65 541 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 CEP83Q9Y592 693 aa13.19□□□□□ -0.3
NPLOC4-213ENST00000573519 LNP1A1A4G5 178 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 FAM170AA1A519 330 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 GRAP2O75791 330 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 TRUB2O95900 331 aaKnown RBP13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 CFIP05156 583 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 HLA-EP13747 358 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 ITPKAP23677 461 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 PRKCHP24723 683 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 EEF1GP26641 437 aaKnown RBP13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 CD70P32970 193 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 CLCN1P35523 988 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 NNTQ13423 1086 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 STX1AQ16623 288 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 ZC3H12AQ5D1E8 599 aaKnown RBP13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 TRIM61Q5EBN2 209 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 TCP11X2Q5H9J9 407 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 SPDYCQ5MJ68 293 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 MBLAC2Q68D91 279 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 FAM183BPQ6ZVS7 135 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 CHSY1Q86X52 802 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 TMPRSS6Q8IU80 811 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 SYT12Q8IV01 421 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 CFAP52Q8N1V2 620 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 WDTC1Q8N5D0 677 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 ZNF366Q8N895 744 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 WFDC5Q8TCV5 224 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 PRCCQ92733 491 aaPredicted RBP13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 RNF34Q969K3 372 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 AZIN2Q96A70 460 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 PRICKLE1Q96MT3 831 aaPredicted RBP13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 LSM14BQ9BX40 385 aaKnown RBP13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 NUSAP1Q9BXS6 441 aaKnown RBP13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 MKRN2Q9H000 416 aaKnown RBP13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 NUCKS1Q9H1E3 243 aaKnown RBP13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 TMEM74BQ9NUR3 256 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 ANO10Q9NW15 660 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 FANCLQ9NW38 375 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 PCDHGC3Q9UN70 934 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 FHOD1Q9Y613 1164 aa13.18□□□□□ -0.3
NPLOC4-213ENST00000573519 RALGAPA1Q6GYQ0 2036 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 C4orf47A7E2U8 309 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 ATP5BP06576 529 aaKnown RBP13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 TPM2P07951 284 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 ACADMP11310 421 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 POLR2EP19388 210 aaKnown RBP13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 SNX16P57768 344 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 BPIFB4P59827 614 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 RPS24P62847 133 aaKnown RBP13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 PITX1P78337 314 aaPredicted RBP13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 IRX4P78413 519 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 CDK17Q00537 523 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 ZNF33AQ06730 810 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 KCNMA1Q12791 1236 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 CDH18Q13634 790 aa13.17□□□□□ -0.3
NPLOC4-213ENST00000573519 ENPP2Q13822 863 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms