RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SLC30A1Q9Y6M5 507 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 IQANK1A0A1B0GTG1 560 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 FGF19O95750 216 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 MARCKSL1P49006 195 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 GEMP55040 296 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 CCDC15Q0P6D6 951 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 BRMS1LQ5PSV4 323 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 ARL14EPQ8N8R7 260 aaPredicted RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 ANKS4BQ8N8V4 417 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 IRGQQ8WZA9 623 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 BBS2Q9BXC9 721 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 FUT8Q9BYC5 575 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 CYLDQ9NQC7 956 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 PLK2Q9NYY3 685 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 SAE1Q9UBE0 346 aaPredicted RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 GOLGA8KD6RF30 607 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 FANCGO15287 622 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 RNASEH1O60930 286 aaKnown RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 GSTA1P08263 222 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 GSTA2P09210 222 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 FDFT1P37268 417 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 LIG3P49916 1009 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 VCPP55072 806 aaKnown RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 TAS2R40P59535 323 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 CLLU1OSQ5K130 101 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 C1orf220Q5T0J3 134 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 FYB2Q5VWT5 728 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 RPAINQ86UA6 219 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 MYLK4Q86YV6 388 aaPredicted RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 TDRD5Q8NAT2 981 aaKnown RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 COLGALT1Q8NBJ5 622 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 C2orf49Q9BVC5 232 aaPredicted RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 ZYG11BQ9C0D3 744 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 CLDND1Q9NY35 253 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 CHMP2BQ9UQN3 213 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 PLAAQ9Y263 795 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 TARSL2A2RTX5 802 aaKnown RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 FGF10O15520 208 aaPredicted RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 TBL1XO60907 577 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 PAGE1O75459 146 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 ASMTLO95671 621 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 S100BP04271 92 aaPredicted RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 GOT1P17174 413 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 ERCC2P18074 760 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 WDR5P61964 334 aaKnown RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 INCA1Q0VD86 236 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 MMRN1Q13201 1228 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 KLHL38Q2WGJ6 581 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 FOXR1Q6PIV2 292 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 PPIL6Q8IXY8 311 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 BLOC1S5Q8TDH9 187 aa10.41□□□□□ -0.74
SMG6-213ENST00000573166 USP13Q92995 863 aaPredicted RBP10.41□□□□□ -0.74
SMG6-213ENST00000573166 RBAK-RBAKDNI3L0D1 243 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 APOC4-APOC2K7ER74 178 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 TULP2O00295 520 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 STAU1O95793 577 aaKnown RBP10.4□□□□□ -0.74
SMG6-213ENST00000573166 APOC2P02655 101 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 ATP5BP06576 529 aaKnown RBP10.4□□□□□ -0.74
SMG6-213ENST00000573166 CCT5P48643 541 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 NR2C2P49116 596 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 KRT33BQ14525 404 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 TTC31Q49AM3 519 aaPredicted RBP10.4□□□□□ -0.74
SMG6-213ENST00000573166 TAF1BQ53T94 588 aaPredicted RBP10.4□□□□□ -0.74
SMG6-213ENST00000573166 AADACL2Q6P093 401 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 TMEM139Q8IV31 216 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 MMGT1Q8N4V1 131 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 CLEC4CQ8WTT0 213 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 PIK3R5Q8WYR1 880 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 MED4Q9NPJ6 270 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 PAK6Q9NQU5 681 aaPredicted RBP10.4□□□□□ -0.74
SMG6-213ENST00000573166 FAM50BQ9Y247 325 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 AAR2Q9Y312 384 aaKnown RBP10.4□□□□□ -0.74
SMG6-213ENST00000573166 A0A087WUV0 522 aaPredicted RBP10.4□□□□□ -0.74
SMG6-213ENST00000573166 BTNL10A8MVZ5 291 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 E5RI56 91 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 CA3P07451 260 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 CFHP08603 1231 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 SERPINF2P08697 491 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 NRIP1P48552 1158 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 CARSP49589 748 aaKnown RBP10.4□□□□□ -0.74
SMG6-213ENST00000573166 MXRA7P84157 204 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 ADCY2Q08462 1091 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 STARD3Q14849 445 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 POLNQ7Z5Q5 900 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 LINC00523Q86TU6 105 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 ZNF557Q8N988 423 aaPredicted RBP10.4□□□□□ -0.74
SMG6-213ENST00000573166 VRTNQ9H8Y1 702 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 SCUBE2Q9NQ36 999 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 ASB3Q9Y575 518 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 EVPLQ92817 2033 aa10.4□□□□□ -0.74
SMG6-213ENST00000573166 A0A1W2PRU2 124 aa10.4□□□□□ -0.75
SMG6-213ENST00000573166 FAM47DPA6NHR8 397 aa10.4□□□□□ -0.75
SMG6-213ENST00000573166 STX7O15400 261 aaKnown RBP10.4□□□□□ -0.75
SMG6-213ENST00000573166 UNGP13051 313 aaPredicted RBP10.4□□□□□ -0.75
SMG6-213ENST00000573166 CORO1AP31146 461 aaKnown RBP10.4□□□□□ -0.75
SMG6-213ENST00000573166 AFF1P51825 1210 aaKnown RBP10.4□□□□□ -0.75
SMG6-213ENST00000573166 KPNA2P52292 529 aaKnown RBP10.4□□□□□ -0.75
SMG6-213ENST00000573166 IRX4P78413 519 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms